Xylella fastidiosa M12: Xfasm12_1566
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Entry
Xfasm12_1566 CDS
T00677
Name
(GenBank) toxin secretion ABC transporter ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm02010
ABC transporters
xfm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Xfasm12_1566
03070 Bacterial secretion system
Xfasm12_1566
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfm02000
]
Xfasm12_1566
02044 Secretion system [BR:
xfm02044
]
Xfasm12_1566
Transporters [BR:
xfm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Xfasm12_1566
Secretion system [BR:
xfm02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Xfasm12_1566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
AAA_18
NB-ARC
DUF87
nSTAND3
PRK
Zeta_toxin
MgtE
Motif
Other DBs
NCBI-ProteinID:
ACA12477
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All DBs
Position
1634436..1636598
Genome browser
AA seq
720 aa
AA seq
DB search
MTYKNPLATQQNQRASNPQPDSSLHGLVLLAQFHGIAADPVQIAHDFGRSGEPFDETTLL
LAAKKLGLKAKVVTQPVTRIAMAALPALALIPGGTAFIVAKVTGNQILIHDLADQRPRTI
SHDEFTARYAGRLLQVASRASVLGNLAKFDFSWFIPAVVKYRKLLAEVFAVSLFIQIFAL
VTPLFYQVVMDKVLVHQALSTLEVIVVGLISLALFEVVLTALRTHVFAHTTSKIDVELGA
RLFRHLLALPLAYFESRRVGDTIARVRELENIRHFLTGQALTSVLDLLFTVVFLSVMFWY
SSWLTLIVVISLPIYVLISAFITPVLRKRLDEKFARGADNQAFLVETVSGIGTVKAMAVD
PRVTRTWDNQLAGYVSASFSVTKIATLGQQSVQLVQKLTNVAVLFWGAKLVIDGQLSLGQ
LIAFNMLSGQVTAPIIRLAQLWQDFQQVGLSVERLGEILNTRTELPGSRMTLPPIQGRIT
FERLIFRYRPDTPDVLSGIDLDIQPGEVIGIVGRSGSGKSTLTKLVQRMYVPERGRVLVD
SHDLSLADPAWLRRQIGVVLQENFLFNRSVRENIAMADPGIPLERVIHAATLAGAHPFIA
ELPEGYDTKIGEHGTGLSGGQRQRIAIARALIGDPRILIFDEATSALDYESEHAVMQNMR
AICKGRTVLIIAHRLSTVRNADRIVVIDKGKIVESGSHETLLNRNNGHYAHLYRLQQGTT
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacatacaaaaatccccttgcaacgcaacagaatcaacgcgcttccaatccacagcct
gacagctcactccacggcttagtcctccttgcccaattccatggcattgcggctgacccc
gtacagatagcgcatgacttcgggcgcagtggcgaaccattcgatgaaacaaccttgcta
ctggccgccaaaaaactcggactaaaagccaaagtcgtcacccaaccggtcacccgtatc
gcaatggccgcattacctgcactcgcactgatccctggaggaacggcatttatcgtcgcc
aaagtgacaggcaaccagatactgatccacgacctggcagatcaacgaccacgcacaatc
tcacacgatgaatttaccgcacgctacgccggccgcttactccaagtcgcctcccgcgca
tcggtcctaggaaatctggctaaattcgactttagctggttcatccccgcagtggtcaaa
tatcgcaaactgctggctgaagtctttgcagtgtcattatttatccagatattcgcactg
gtgacacccctgttctaccaagtcgtgatggacaaagttctcgtacaccaagcactcagc
acccttgaagtcattgtagttggcctaatctccctggccttattcgaagtagtactcacc
gcactacgcacccatgtcttcgcacataccaccagcaaaattgatgttgaactgggcgct
cgcttattccgccatctattagcactccccttagcgtattttgaatcgcgcagggttggc
gacaccatcgcccgcgtacgcgaactagaaaacatccgccacttcctcaccggccaagca
ctgacctccgtcttagacctcctattcaccgtcgtctttttgtccgtcatgttttggtac
agcagctggctcaccctgattgtggtgatctcattacccatatacgtactgatctccgca
ttcatcaccccagtactccgcaaacgtctggatgaaaaatttgcacgcggcgcagacaac
caagcatttttagtggaaaccgtcagcggcattggcaccgttaaagcaatggccgtagac
ccacgtgtcacccgcacctgggacaaccaactggcgggatacgttagcgccagctttagc
gttaccaaaattgccaccctcggccaacagagcgttcaattagtacagaaactgaccaac
gttgccgtattattttggggcgccaaactggtaattgacggacaactgtccctcggacaa
ctaattgccttcaacatgttgtccggccaagtcactgcccccatcatccggctcgcccag
ctatggcaggattttcaacaagtcggactctccgtcgaacgactcggcgaaattctgaac
acccgtaccgaactccccggcagccgcatgacattgccgcccatccaagggcgcatcacc
ttcgaacgcctcatcttccgctaccgtccagatacccccgacgtgctctccggaatcgac
ctagacattcaacctggcgaagtcatcggcatcgtaggacgctccggctctgggaaaagc
accctgacaaaactcgtacagcgcatgtacgtcccggaacgcggccgcgtcttggtcgac
agccacgacctctcattggccgatcccgcctggctgcgtcgccaaattggcgtcgtactg
caagaaaatttcctgttcaaccgcagcgtccgtgaaaacatcgccatggccgacccggga
atccccctggaacgcgtcatccacgcagcgacattagccggtgcccatcccttcattgct
gaactaccagaaggctatgacaccaagattggtgaacacggtacaggactctccggcggc
caacgccaacgcatcgccattgcccgcgccctgattggcgacccacgtatccttattttc
gatgaagccaccagcgcactcgactacgaatcagaacatgccgtcatgcaaaacatgcga
gccatttgcaaaggccgcaccgttctcatcatcgcccaccgcctctccacagtccgtaat
gccgatcgtatcgtcgtcattgataaaggaaaaatcgtagaaagcggctcccacgaaaca
ctcctcaaccgcaacaacggtcattacgcccacctctaccgactccaacaagggaccaca
tga
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