Xylella fastidiosa M12: Xfasm12_1693
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Entry
Xfasm12_1693 CDS
T00677
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Xfasm12_1693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfm03019
]
Xfasm12_1693
03110 Chaperones and folding catalysts [BR:
xfm03110
]
Xfasm12_1693
03029 Mitochondrial biogenesis [BR:
xfm03029
]
Xfasm12_1693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xfm04147
]
Xfasm12_1693
Enzymes [BR:
xfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Xfasm12_1693
Messenger RNA biogenesis [BR:
xfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Xfasm12_1693
Chaperones and folding catalysts [BR:
xfm03110
]
Heat shock proteins
HSP60 / Chaperonin
Xfasm12_1693
Mitochondrial biogenesis [BR:
xfm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Xfasm12_1693
Exosome [BR:
xfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Xfasm12_1693
Exosomal proteins of other body fluids (saliva and urine)
Xfasm12_1693
Exosomal proteins of breast cancer cells
Xfasm12_1693
Exosomal proteins of colorectal cancer cells
Xfasm12_1693
Exosomal proteins of bladder cancer cells
Xfasm12_1693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACA12597
UniProt:
B0U418
LinkDB
All DBs
Position
1760576..1762219
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEIIFSEKARSRMVYGVNLLANAVKATLGPKGRNVVLDKNFGSPIITKDGVSVAKEI
ELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGI
DKAVIAAVTELKKISKPTSDDKAIAQVATISANSDESIGNIIAEAMKKVGKEGVITIEEG
TTLENELDVVEGMQFDRGYSSPYFINNQQSQIVELDNPYILLHDKKISNVRDLLTVLDAV
AKESKQLLIVAEEVEGEALATLVVNNIRGIIKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATTSHLGKAKKVRVSKENTTIIDGMGDNDAINGRVKQIKTQIEETTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALLATRAAVEEGVIPGGGVALI
RVITAISNLKGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGKGNFGYNA
ATGEFGDMVNFGILDPTKVTRSALQNAASIAGLMITTEAMIAEAPKKDEPTPPAAGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaaattattttcagtgaaaaagcccgttcacgtatggtgtacggggtg
aacctacttgctaatgcagtaaaagccaccttaggtcccaaaggccgcaacgtggtgctt
gataagaacttcggctccccaatcattactaaagacggcgtctctgtcgccaaagaaatt
gagctggccgacaagtttgaaaacatgggcgcacaaatgcttaaagaagttgcgtccaaa
acaaatgaccatgcaggcgacggcaccaccactgccacggtactagcccaggcgttgatc
cgtgaaggatgcaaagcagtggccgctggtatgaatccaatggatcttaagcgtggtatc
gataaagcagtcattgccgcagttaccgaactgaagaagatctccaagccaaccagcgac
gataaagcaattgcccaagtcgcaacgatctctgctaactcagacgagtctatcggcaac
attattgccgaagcaatgaagaaggtcggtaaagaaggagtgattaccattgaggaaggc
acaactctagaaaacgaattggatgtcgtcgaagggatgcagtttgaccgtggttactct
tcgccatatttcatcaacaaccagcagtcccaaattgttgagctggataatccctacatc
ctccttcacgacaagaaaatttccaatgtgcgcgatttactcaccgtgcttgacgccgtc
gccaaagaaagcaagcagttgctgatcgtcgctgaggaagtcgaaggcgaagctttggca
actctggtcgttaacaacatccgcggcatcatcaaagtttgcgcagtcaaagcacctggc
ttcggtgatcgtcgcaaagccatgctggaagatatggctgtgctgacaggcggcaccgtc
atctcggaagaagtaggtctgtctctggaaaaggccacgaccagccaccttggcaaggcc
aagaaagtacgcgtctctaaagaaaacaccaccattattgatggtatgggtgacaacgat
gcgatcaatggtcgcgtcaagcaaatcaaaacccagatcgaggaaaccacctcggactac
gaccgcgaaaaactgcaggaacgtgtagccaagctcgccggtggtgtagccgtcatcaag
gtcggtgctgcaaccgaagtggaaatgaaggaaaagaaagcacgtgttgatgatgcttta
cttgcaacgcgtgcagccgttgaagaaggagtaattccaggcggcggcgtggccctgata
cgtgtaatcacagcaatcagcaatctgaagggtgccaatgaagaccagacacacggcatt
caaatcgcattgcgggctatggaagcaccattacgcgaaattgttgccaacgccggtgaa
gagccatcggtcatcttaaataaggtgaaagaaggcaagggcaattttggctacaacgcc
gctactggcgaattcggcgatatggtcaattttggcatcctggacccaaccaaggtcaca
cgttcagcactgcagaacgctgcttcaatcgctggcctgatgatcaccacagaagcaatg
atcgccgaggctccgaagaaggacgagccaaccccacctgctgctggcggcggtatgggc
ggtatgggcggtatggatttctaa
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