Xylella fastidiosa M12: Xfasm12_1912
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Entry
Xfasm12_1912 CDS
T00677
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00260
Glycine, serine and threonine metabolism
xfm00460
Cyanoamino acid metabolism
xfm00630
Glyoxylate and dicarboxylate metabolism
xfm00670
One carbon pool by folate
xfm00680
Methane metabolism
xfm01100
Metabolic pathways
xfm01110
Biosynthesis of secondary metabolites
xfm01120
Microbial metabolism in diverse environments
xfm01200
Carbon metabolism
xfm01230
Biosynthesis of amino acids
xfm01240
Biosynthesis of cofactors
xfm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Xfasm12_1912
09102 Energy metabolism
00680 Methane metabolism
Xfasm12_1912
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Xfasm12_1912
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Xfasm12_1912
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Xfasm12_1912
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Xfasm12_1912
Enzymes [BR:
xfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Xfasm12_1912
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACA12788
UniProt:
B0U4K9
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All DBs
Position
complement(1990677..1991969)
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AA seq
430 aa
AA seq
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MLIASPVFFSGVAMFPRDARLDMYDPELAKAIAAEVRRQEDHVELIASENYCSTLVMQVQ
GSQLTNKYAEGYSGKRYYGGCEYVDIAEQLAIERAKQLFGADYANVQPHSGSQANQAVYF
ALLQPGDTILGMSLAHGGHLTHGANVNVSGKLFNAVQYGVNAQGLIDYEAVESLALEHRP
KMVVAGFSAYSQKIDWVRFRAIADQVGAYLLVDMAHVAGLVAAGVYPNPLPHAHVVTSTT
HKTLRGPRGGIIVAQAPQEALVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKVY
QQQVVKNAKAMAETLMLRGYKIVSGGTENHLMLVDMIGRDVSGRDAEGALGQAHITVNKN
AVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADATVIAAVREKVA
AQCKKYPVYR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgcatcccctgtgtttttttccggagttgccatgttcccgcgtgatgctcgt
cttgatatgtacgatcccgagttggctaaggccatcgctgctgaagtgaggcgtcaggag
gatcacgttgagttgattgccagtgaaaattattgcagtacgttggtgatgcaggtgcag
gggagtcaactgactaataagtatgctgaagggtattctggaaagcgttactacggtggt
tgtgagtatgtcgatatcgctgagcaattggcgattgagcgtgccaaacaactgtttggt
gccgactatgccaatgtgcagccccatagcggttcacaagccaatcaagcggtgtacttt
gccttgttgcagccaggcgatacgatcctcgggatgagcttggcgcatggcggccacttg
actcatggcgccaatgtcaatgtgtctggcaagttgttcaatgcggttcagtacggagtg
aatgctcaagggttgattgattacgaggctgttgaatcgcttgcgttagagcatcggccg
aagatggttgtggcgggcttttcggcgtattcgcagaaaatcgattgggtgcgcttccgt
gccattgctgatcaggtgggcgcttacttgcttgtggatatggcacatgtggctggcttg
gtggcggctggtgtctatccgaatccgctgccgcatgcgcatgttgtgacttcgacgacg
cataagacactgcgcggcccacgtggcggcattattgtggcgcaggctccgcaggaggcg
ttggttaagaagttgcagtcgatagtgtttcctgggatccagggtggtccattgatgcat
gtgatcgcggctaaagcggttgcttttaaggaggcgctggagcctgcgtttaaggtgtat
cagcagcaggtggtgaagaatgcgaaggcgatggctgagaccctcatgttacgtggctat
aagattgtctctggtggtacagaaaatcatttgatgctggttgacatgatcggcagggat
gtttccgggagggatgctgagggtgcactgggtcaggctcatatcaccgtcaataagaat
gccgtgccagatgatccgcgctctccgttcgtaacctccgggttacgcttggggactccg
gcagtcacgacgcggggttaccaggaacaggattgtgtggacttagcgcactggattgct
gatgtgcttgacgcgcctgcggatgcgacggtcattgccgcagtccgtgagaaggttgcg
gcgcagtgcaagaagtatcctgtgtatcgctga
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