Xylella fastidiosa M12: Xfasm12_1947
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Entry
Xfasm12_1947 CDS
T00677
Name
(GenBank) bifunctional enzyme involved in thiolation and methylation of tRNA
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xfm
Xylella fastidiosa M12
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfm03016
]
Xfasm12_1947
Enzymes [BR:
xfm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Xfasm12_1947
Transfer RNA biogenesis [BR:
xfm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Xfasm12_1947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACA12820
UniProt:
B0U4P1
LinkDB
All DBs
Position
2024332..2025825
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AA seq
497 aa
AA seq
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MTGTSNIPTHGKEHKDAPALLPLPAPNPHHTHAAHPGDPSHDRPPSRGKLFIKTHGCQMN
EYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVFSQLGRWRALKTNGRD
VIIGVGGCVASQEGETIVKRAPYVDLVFGPQTLHRLPDMIRARREQNRPQIDISFPEIEK
FDHLPTPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVRE
INLLGQNVNAYRGAMDPGPSNNTNPAAPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFS
DSLVEAYRDIPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSD
FIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDHTPDEIKRTRLEHL
QKHINAYAADISKRMIGTVQTVLVEGPSKKNPNELTGKTENMRPVNFPGNPRLIGQFIDV
HITEALTNSLRGRVHTN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacatcaaacatccccacacacggcaaagagcacaaagacgcccccgcactg
ctgccattgcccgcaccaaacccacaccatacccacgcagcacatcctggcgacccatca
cacgaccgccccccatcgcgcggaaaactctttattaaaacccacggctgccaaatgaac
gaatacgactcggccaaaatggccgacgtactcaccaccaccgaagcactggaactgacc
gacaatcccgaagaagcagacattattctcatcaatacctgttcaatccgcgaaaaggcc
caagaaaaagtattcagccaactcggacgctggagagcactgaaaaccaatggcagagat
gtcatcatcggcgtcggcggttgcgttgcctcccaagaaggagaaacaatcgtcaaacgc
gccccttacgttgacctggtctttggcccgcaaacattgcatcgcctcccagacatgatc
cgcgcccgacgcgaacagaaccgaccgcagatcgacatcagcttcccggaaatcgaaaaa
ttcgaccaccttcccacaccgcgtgccgaaggcccaagcgcattcgtctcgattatggaa
ggctgctccaaatattgctcattttgtgtcgttccctacacccgcggcgaagaagtcagc
cgcccatttgaagacgtgttgaccgaaatagcacacctagcgacccaaggcgtccgtgaa
atcaacctgctcggccaaaacgtcaacgcctatcgcggagcgatggaccctggcccatcc
aacaacaccaaccctgcggcccccccttatgccgatctcggcctcctcatccgtgcaatc
gcccaattcgaaagcatcggacgtatccgcttcaccacatcccatcccctggaattttcg
gattccctcgtagaagcctaccgcgacatcccacaactggctaaccacctgcaccttccc
gttcaatccggcagcgaccgtatcctctcagcgatgaaacgtggctacaccgcactggaa
ttcaaatccaaaatccgcaaactgcgcgcagttcgcccggacatttcgatcagctccgac
ttcatcatcggcttccctggtgaaagcgacaccgacttccagaagaccatgcagctcatc
gaagacattggtttcgaccagagcttctctttcatctactcacgccgccctggcacaccg
gcctccaaccttgaggaccacacacccgatgaaatcaaacgcacccgcctagaacaccta
caaaagcacatcaacgcctatgccgccgacatctcaaaacgcatgattggcaccgtgcaa
accgtgctggtggaaggaccatcaaaaaagaaccctaacgaactgaccggaaaaaccgaa
aacatgcggccagtcaacttccctggcaacccacgcctcatcggacaatttattgacgta
cacatcaccgaagcactgaccaactcattacgcggccgcgtgcataccaactga
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