Xylella fastidiosa M12: Xfasm12_2046
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Entry
Xfasm12_2046 CDS
T00677
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00470
D-Amino acid metabolism
xfm00550
Peptidoglycan biosynthesis
xfm01100
Metabolic pathways
xfm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Xfasm12_2046
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Xfasm12_2046
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Xfasm12_2046
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfm01011
]
Xfasm12_2046
Enzymes [BR:
xfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Xfasm12_2046
Peptidoglycan biosynthesis and degradation proteins [BR:
xfm01011
]
Precursor biosynthesis
Amino acid ligase
Xfasm12_2046
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACA12912
LinkDB
All DBs
Position
complement(2145285..2146247)
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AA seq
320 aa
AA seq
DB search
MGMSIFSLFPRYTDPAVFGRVAVLLGGTSAEREVSLLSGRNVLEVLRMRGVDAQSVDGVP
ALAQALVERRFDRVFNVLHGHNGGGEDGVVQGLMQAFGVPYTGSDVLASALSMDKVRTKQ
VWLALGLPTPRYASLSVCATAVEVRKAVEMLGFPVIIKPAKEGSSVGVSRVFALEHLEEA
VALAARYEGELLMEQLIEGDELTVSILDEMALPSIRIVPQGQWYDYNAKYLAEDTQYVCP
GLDDVAEAEIAQLALAAFHGVGCRGWGRVDVMRERSSGRFFLLEVNTAPGMTTHSLVPKA
ASQLGMGFDDLVWRILEQTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagcatattttcactgtttccacggtatacggatccggcggtgtttggtcgt
gttgcagtgttattaggggggacgtctgctgagcgtgaggtgtctttgctttcaggtcgt
aatgtgttggaagtattgcgcatgcgcggtgttgatgctcagtcggtagatggggttccg
gcactcgctcaggcgctggtggaacggcgttttgatcgtgtgttcaatgtgttgcacggc
cataatggcggtggtgaggatggtgtggtgcaggggttgatgcaggcttttggtgtgccg
tatacaggttcggatgtgcttgcttcagcgttgagtatggataaggtgcgcactaaacag
gtttggcttgcgctgggtttgccgacgccgcgttatgcgagtttgagtgtgtgtgccact
gctgttgaggtgcgtaaggcggttgagatgctaggttttccggtgattattaagccggcc
aaagaagggtctagtgttggtgtcagtcgtgtgtttgcgctggagcatttggaggaggcg
gttgctttagcggcgcgttacgagggtgagttgctgatggagcagttgatcgaaggggat
gaattgacggtgtcgattcttgatgagatggcgttgccctcaattcggatcgttcctcag
gggcagtggtatgactataacgcgaagtatcttgctgaagacacgcagtatgtgtgcccg
ggtttggatgatgttgctgaggctgaaatcgctcaacttgcgttggctgcattccatggt
gttggttgtcgtggttggggtcgtgtggatgtgatgcgcgagcgcagcagtgggcgcttt
ttcttattggaagtcaatactgctcctgggatgacgactcactcgttagtgccgaaggca
gcgagtcagttgggtatgggttttgatgatttggtgtggcggattctggagcagacttta
tga
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