Xylella fastidiosa M12: Xfasm12_2085
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Entry
Xfasm12_2085 CDS
T00677
Name
(GenBank) Exodeoxyribonuclease VII
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Xfasm12_2085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfm03400
]
Xfasm12_2085
Enzymes [BR:
xfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Xfasm12_2085
DNA repair and recombination proteins [BR:
xfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Xfasm12_2085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACA12948
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All DBs
Position
2184396..2185793
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AA seq
465 aa
AA seq
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MRRLWRQKYTASCLTKSSHAQMQHRDEILTPSQLNTLARDLLESAFPLVWIEGELGNVSR
PSSGHLYVTLKDAQAQVRCAMFKPKSQWLTFQPREGLRVLARGRLTLYEARGDYQIVLDH
LEEAGEGALRRAFEQLRIRLEAEGLFDPARKQPLPVHPRRIAVITSPSGAVIRDIFSVLM
RRFPLVEIELLPSLVQGDTAAAQITHLLRCADNSGRYDAILIARGGGSLEDLWAFNNEQL
ARTIAAAHTPVISAIGHETDFTLADFAADIRAPTPSVAAELLVPNQRALRQHLGQLQQRL
LHLQQHRLDQAIQRADQLGLRLQARNPKMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQL
RNHHTRLYALNPRQQIAGLQKHLKHLNPQQPLQRRLQQEQLRLHGLVRALEAVNPLATVA
RGYALVRRADNNTLVRDSAQVCVGDVLDTKLAHGQLRVRVEVSST
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcggctctggagacagaagtacactgcatcctgcctgaccaagtcatcacatgca
cagatgcagcaccgcgacgagatcctgacacccagccagctcaatactctcgcccgcgat
ctgcttgaaagtgcgtttccgctggtgtggattgagggcgaactcggcaatgtcagccgc
ccgtcttcaggccatctgtatgtcacgctgaaggacgcgcaggcgcaggtacgctgtgcg
atgtttaagcccaagagccagtggctcacgtttcagccgcgcgaaggtttgcgggtgctc
gcacgggggcggctgacgttgtatgaagcgcgcggtgattaccaaatcgtcctcgaccat
ctcgaagaggccggtgaaggggcgctacgtcgggcctttgaacaactacgtatccggctc
gaagccgaaggcctgttcgatcctgcacgcaaacagcctctacctgtccatccccgccgc
atcgcagtgattacctcgcccagcggcgctgtaatacgtgacattttcagcgtactgatg
cggcgctttccactggtggaaatcgaattactgccctcgttggtgcagggcgatacagcg
gcggcacaaatcacccatttgctgcgctgcgcagacaacagcggccgttacgacgccatt
ttgatcgcgcgcggcggcgggtcacttgaggacctttgggcatttaataacgagcagctg
gcacgtacaatcgctgccgcacacacgccggtgatctcggcgattggtcatgaaactgat
ttcactcttgcggattttgccgcagacatcagagcacccactccatctgttgcggctgaa
ttgctggtccccaaccaacgcgcactgcgccagcacttaggccagttgcagcagcgcttg
ctgcatttgcagcaacaccgtctggaccaagccatccaacgggccgaccaactggggctg
cgcttgcaggcacgcaatcctaagatgcacttgcgtctgttggcgcaacgccaagccgaa
gctggacgccgccttcaacaatgcctgcatcacgtgcttgaccgcgcccaagggcaacta
cgcaatcaccacacccggctgtatgcactcaacccaagacagcagattgcgggattgcaa
aagcacctaaagcatttaaatccacagcaaccgctacagcgacgtctgcaacaggagcaa
ctgcgtctgcatgggttggtacgtgctttggaggcggtcaaccctttggccacggtggcg
cgcggctatgcgctggtacgtcgcgccgacaacaacacgttggtgcgcgacagcgctcag
gtctgtgtgggcgatgttctagacaccaagctggcacatggccagctccgggtcagggtc
gaagtaagcagcacatga
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