Xylella fastidiosa M12: Xfasm12_2094
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Entry
Xfasm12_2094 CDS
T00677
Name
(GenBank) Phenylalanine--tRNA ligase
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Xfasm12_2094
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xfm01007
]
Xfasm12_2094
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfm03016
]
Xfasm12_2094
Enzymes [BR:
xfm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Xfasm12_2094
Amino acid related enzymes [BR:
xfm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Xfasm12_2094
Transfer RNA biogenesis [BR:
xfm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Xfasm12_2094
Prokaryotic type
Xfasm12_2094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ACA12956
LinkDB
All DBs
Position
complement(2194716..2197094)
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AA seq
792 aa
AA seq
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MKFSENWLRNHVPIQANRDVLVATLTAIGLEVENVAVLGEALDLIVVARIVNVVPHPESD
LLQICQVDVAQDNLLQIVCGASNVRPGLVVPLALLGAKIGALTIKSTTLRGVESNGMLCS
AKELGLDTEASGLMELPEDAPIGTPLADYLALPDASIEIKLTPNRADCFSVRGIAFDVAA
ACASEVTPFHIDEIPAVSARTLPVELHAGANAPRYCGCVIEGIDSAAPTPVWMAERLRRS
GIRPVSLLVDITQYVMLELGQPMHAFDVDTLRGPIGVRLSRNDEALKLLDGRTVVLDNDF
LVVTDADQPIALAGLIGGWETRITDTTVNVFLEAAHFAPAAIMGRGRKLGLHTDASHRFE
RGVDPALPPQAIAFATRLILELAGGKPGSLIHVELPEYLPAPASILLRRTRIARLLGIVI
DDAEVERILQALGMQVTTQAEGWRVVAPSRRFDIAIEEDLIEELVRIRGYEHLPTALPVG
ASHIAMPSETRLDMTSVRRQLIARELQETINYAFIDAELLRRWQLNTGQVMLMNPLSAEL
AVMRPRLLPGLVAALGRNIARQLERVRLFELGNVFTASDEAGAAPLETRHVAAAVCGDAF
ALQWGEQVRKVDFYDLKGDLESLAAASGAVLTFHSSAQPWGHPGRSADVWCDDMCIGWIG
QLHPALTQTLEINVDVIAFELALEPLVRRALPRAHALSRFPFVRRDLACVVPEHVTWSEL
AITVRDVIGPLLRDVKLFDRYVGKGIEPGFKSLAIGLILQDDTRTLIDRDVDDIMTKVVM
AIQQRHDVRIRS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagcgaaaattggttgcgcaatcatgttcctatccaagccaatcgtgacgtg
cttgtagcgaccctgaccgcgataggccttgaagttgaaaacgtggcagtgttaggtgaa
gctctggacttgatcgtagtggcgcgcatcgtcaatgtcgtgcctcatcccgaatctgat
ctcttacaaatctgtcaagtcgatgttgctcaagacaaccttttacagattgtctgcggc
gcctcaaacgtgcgtcctggcttggtggtgccattggcgttgcttggtgccaagatcggt
gcactgacgatcaagtccaccacactgcgtggggtcgaatccaatggcatgttgtgctca
gccaaagaacttggcttggatacagaggcgtccggtctgatggaactcccggaagatgca
ccgattggtacaccattagccgattatcttgctttgcccgatgctagtattgaaatcaaa
ttgaccccgaaccgtgctgattgcttcagcgtgcgcggcattgctttcgacgtggctgcg
gcctgtgccagcgaggtgaccccgtttcatattgacgagatccccgctgtttctgcgcgt
acgctgcctgttgaattacatgctggtgccaatgccccacgctattgtggctgtgtgatt
gagggtatcgactctgcggcccctactccggtgtggatggccgagcgcctgcgtcgcagc
ggtattcgtccggtgtcattgctggttgatatcacccagtacgtcatgttggaactgggg
cagccgatgcatgctttcgacgtggataccctacgcggtcccattggtgtacgtctctcc
cgtaatgatgaagccttgaagcttctcgatggacgtacagttgtgcttgataacgatttc
ctagttgtgactgatgccgatcaacctattgcactggctggtttgatcggcggttgggaa
acacgcataacagataccactgtcaacgtctttcttgaggctgctcactttgcaccggct
gcgatcatgggacgtggccgtaaacttggcctgcataccgatgccagccaccgcttcgag
cgcggcgtagatccagccttacccccgcaagcgatcgcttttgccacccgtctcatactg
gaacttgctggtggcaagccagggtcattgattcacgttgaattgcccgagtatttaccg
gcaccggcttcgatcttgctgcgtcgcacacgtatcgcgcgcctccttggcattgtcatt
gatgatgccgaggtagagcgtattttgcaggccctggggatgcaggtaacgactcaagcc
gaaggttggcgcgttgttgcaccaagccgccgttttgatattgcgattgaagaagatctg
atcgaagagctggtacgtatccgtggttacgaacatctaccaacagccttgccggttgga
gcgagtcatatcgcaatgcccagtgaaacccgactcgatatgaccagcgtgcgtcgacaa
ttgattgcacgtgaattacaggaaaccatcaactacgccttcattgatgctgagctactg
cgccgttggcaattgaatactggtcaagtcatgttgatgaatcccctgagcgcggagttg
gcagtgatgcgaccacgcttgttaccaggtttggtggcagccttggggcgcaacatcgcc
cgtcagctggaacgcgtgcgcttgtttgaactgggcaatgtatttactgcatctgatgag
gcaggagcagcaccccttgaaacccgacacgttgctgctgccgtatgtggcgatgcgttc
gccttgcagtggggtgaacaggtgcgtaaggtcgatttctacgatctgaaaggggacttg
gaatccctagctgcggccagcggtgcagtcttgaccttccattcctcagcacagccatgg
ggccatccgggccgctcagccgacgtttggtgtgatgacatgtgtattggctggattgga
caattgcatccggcacttacccaaacactggaaatcaacgtggatgtgatcgccttcgaa
ctggctttggaaccgctagtacgccgcgcacttccgcgtgctcatgcactctcacgtttc
ccattcgtgcgccgcgacttggcctgtgtcgtgcccgaacacgttacttggagcgaactg
gcaatcaccgtgcgcgatgtcattggaccgttacttcgcgacgtgaaactgtttgatcgc
tacgtcggtaagggtatcgaaccaggatttaaaagcctggctattggcttgattttgcag
gatgacacgcgcactctgatcgaccgtgacgttgacgacatcatgacgaaggttgtcatg
gcgatccagcaacgacacgacgtgcggattcggtcttga
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