Xylella fastidiosa M12: Xfasm12_2123
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Entry
Xfasm12_2123 CDS
T00677
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xfm
Xylella fastidiosa M12
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfm03032
]
Xfasm12_2123
03400 DNA repair and recombination proteins [BR:
xfm03400
]
Xfasm12_2123
Enzymes [BR:
xfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Xfasm12_2123
DNA replication proteins [BR:
xfm03032
]
Prokaryotic type
DNA Topoisomerases
Xfasm12_2123
DNA repair and recombination proteins [BR:
xfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Xfasm12_2123
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
ACA12980
LinkDB
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Position
complement(2227598..2230279)
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AA seq
893 aa
AA seq
DB search
MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELGAHSD
KSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRYLLVEGQGNFGSVDGDPAAAM
RYTESRMSRISHDLIADIDKETVDFQPNYDEKETEPTVMPTRFPNLLVNGSSGIAVGMAT
NIPPHNLVESINACIALIDNPELDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV
RMRAKADIEVADNGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDGM
RIYIEVKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQILQAFIRHRREV
VTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSPSPQEAKERLLAKTWAPGLVG
TLLSASGGEASRPEDLPQGVGLIGDSYQLTEVQVRQILEMRLHRLTGLEQDKLAEEYQQL
LEIIVGLIRILENPDVLLQVIRDELLKIREEYGDVRRTEIRHSEEDLDILDLIAPEDVVV
TLSHAGYAKRQPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTSTGKVFW
LSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPVREYAENHYVFFATRQGTVKKTPLS
EFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNGKTVRFSENTVRSMGRTATGV
RGIKLTEGEEVVSLIIAEPATGVDMLEEAEETADDDIQTANTADSVHIDPTQDDILCILT
ATENGYGKCTPLAHYPRKGRGTQGVIGIQTTERNGRLVAAVLLGATDEVLLISDGGTLVR
TRGSEISRVGRNTQGVTLIRLSNGEKLQAVERLDASLSIPDETEDDPGTVHPA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgccaaggaaatcatcaaggtcaatctggaagacgagatgcgtaagagc
tacctcgattatgcgatgagcgtaatcgtaggtcgtgcactccccgatgctcgcgatggc
atgaagcctgtgcatcgccgcgtcctgtacgccatgcatgaacttggtgctcacagcgac
aagtcctacttcaaatctgcacgtatcatcggtgaagttctcggtaagtaccatccgcat
ggtgatcagtctgtttacgacaccctggtacgtatggcgcaacccttctctttgcgttac
ttactggtagagggccaaggtaactttggttcggtggacggcgatcctgctgctgcgatg
cgttacaccgagtcgcgcatgtcgcggatcagccacgacctgattgctgacatcgataaa
gagaccgtcgacttccagcccaattacgacgaaaaagaaacggaaccaacggtcatgccg
acccggttcccgaatctattggtcaatggatcgtccgggattgcagtgggcatggccacc
aatatcccgccccataacctcgtcgaatccatcaacgcttgcattgcccttattgataat
ccagaactggatgtcgatggattgatggaatacatccccggtccggatttccccaccgcc
ggcatcatcaacggcaccgctggcattgttgctggctaccgtaccggtcgtggtcgcgtc
cgcatgcgtgccaaggcggatattgaagtggccgacaatggccgtgaagccatcgttgtt
actgagattccttaccaagtcaacaaagcacgtttgatcgaaaaaattgccgagctggtg
aaggaaaagagaatcgatggcatcagcgaactgcgtgacgagtccgacaaggacggcatg
cggatttatattgaagtcaaacgtggcgagtctgccgaggttgtcctcaacaacctctac
cagcagacccagatggagtcggtattcggaattaacatggtggcactggttgacggccgc
ccccaactactcaacctcaaacagatactgcaagccttcatccgtcaccgccgcgaagtg
gtcacccgccgcaccatcttcgaactgcgcaaagcccgtgcccgtgcccacgtcctggaa
ggtttgacggttgccctggccaacattgacgagatgattcacctgatcaaaacctcgcca
agcccacaagaagcaaaagagcgcctgctcgccaaaacctgggcacctggattggtcggc
acattgctcagtgcctcaggtggtgaagcatcgcgcccggaagatctcccgcaaggcgtg
gggctgattggcgactcctatcaactgaccgaagtccaagtacgacagattttggaaatg
cgcctgcaccgcctcaccgggctggaacaggacaagcttgccgaagagtaccagcagctg
ctagagatcattgtcggcctgatccgcatcttggagaacccggatgtcctattacaggtc
attcgtgatgaactcctcaagatacgtgaagaatatggggatgtacgccgtaccgagatc
cgccatagcgaagaagacttagacatcctcgacctcattgcaccagaggatgtcgtcgtc
accctgtcccacgccggctatgccaagcgtcagcccgtgtccgcctaccgtgcccaaaag
cggggagggcgtggccgtgctgctgtgaccacaaaagaagaagacttcattgaccatctc
tggctggtcaacacccacgacaccctgttgaccttcaccagcaccggcaaagtattttgg
ctgtcggtgtaccaattgccagaagccggttccaatgcccgcggtcgccccatcatcaac
tggatccccttggagccaggcgaaaaagtgcaggccgtccttcccgtacgcgaatacgct
gagaaccactatgtgttttttgccacccgccaagggaccgtcaaaaagactcccttgagt
gaatttgcattccgcttagcgcgcggcaaaatcgcgatcaaccttgatcaaggagatgcc
ctgattggtgttgccctgaccgatggcgaacgtgatgtcctgctctttgcctccaatggc
aagaccgtgcgtttcagtgagaacactgtccgctcaatgggtcgcaccgccacgggcgtg
cgcggtatcaaactgaccgaaggagaagaggtggtcagcctcatcattgccgaaccggca
actggtgtggatatgctcgaagaagcggaagaaacggcagacgacgacatccagacagcc
aacactgccgacagcgtgcacattgatcccacccaggatgacatcctctgcatcctgacc
gccactgaaaacggctacggcaaatgcacccccctggcccattaccctcgtaaaggccgt
ggcactcaaggcgtcattggtatccagaccaccgagcgcaatggccgcctggttgctgcc
gtcctattaggtgccaccgacgaagtcctcttgatctctgatggcggcaccctggtgcgt
acccgtggctccgagatttcgcgcgttggccgtaatacccaaggcgtcaccctaatccgc
ttatccaatggtgaaaaacttcaggcagtcgaacgtctggatgcttccttgagtatcccg
gatgagacagaggacgatcccggcaccgtacaccctgcctga
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