Xylella fastidiosa M12: Xfasm12_2239
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Entry
Xfasm12_2239 CDS
T00677
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Xfasm12_2239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfm03400
]
Xfasm12_2239
Enzymes [BR:
xfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Xfasm12_2239
DNA repair and recombination proteins [BR:
xfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Xfasm12_2239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
AAA_30
Zn_ribbon_PriA
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACA13090
LinkDB
All DBs
Position
2365729..2367930
Genome browser
AA seq
733 aa
AA seq
DB search
MPPTILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRIRVPFGKRELIGVVVELPSAEMSV
PLREAFAWIDRIPILDGELAQSLQWLSHYTHTPLGEILATALPGLLRHGKPLPETWTCWA
WRLTETGHTAAPKLRRNSRSAQLAELLTASDQTEDALNTRMNHWRAVARNLTKRGYVERI
KKPTTVPVIIQTTSNTVPVLNTEQQKAVETLNANVGFKIYLLDGVTGSGKTEVYLQAIAT
CLAASKQALVLVPEIGLTPQLLTNFHARLGIPVHALHSKLADSERARVWATARCGEARLV
LGTRSAVFTPLPHAGLIIVDEEHDTSYKQQDGIRYNARDFALLRGKALNVPVILGSATPS
LESLYNAHNGRYKHLRLTYRAGQAYAPQVRVLDVRKRPLKDGLSPEVLTGINATLARDEQ
VLVFKNRCGYSPVLLCHDCGWTATCQQCSTSVHHTPMTVYSGGTYLQCHHCNARQPMPLS
CPDCGSTALQPQGIGTERLEARLIEAFPKHPVVRIDRNTTQHRDGLKTQFTKLGNAAGIL
VGTQILAKGHHLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRAKHAGEVWL
QTHHPDHPLLQTLINGGYHTFANTELQQRQAAGLPPFAHLALLRAEAKDTTSTQQFLATV
RKHMPTNNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNALHRTLNILIPAIHSLPEARR
VRWSLDVDPVDLY
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccccctactatcctacgtgtggcgttgccaatccctttaccgcaatgcttcgactat
ctgccgccaagcggcataccactcccagattcaaccttaggctgccgcatacgtgtgcca
ttcgggaaacgtgagctgatcggtgtagtggtcgaacttccatcagccgaaatgtcggta
ccattacgcgaggcattcgcctggattgaccgtataccaattctagatggcgagctggca
caatcgttacagtggctgtcacactacacgcataccccactaggtgagatattagctacg
gctcttcccgggctgttacgtcatggtaaacccttaccagagacctggacctgctgggct
tggcgtctaaccgaaaccgggcacactgccgctcccaagctgcgtcgcaacagccgctca
gcacaactggctgaattactcaccgccagtgatcaaacggaagatgcacttaacactcgg
atgaatcactggcgcgcagttgcacgcaacctaaccaagcgtggttatgtcgaacgcatc
aagaaacctacaaccgtacctgtaatcatccagaccacaagcaacaccgtacctgtactc
aacactgaacaacagaaagcagttgagacactaaacgctaacgtaggcttcaaaatttat
cttctagatggagtcaccggcagcggtaaaacagaagtctacctacaagccatcgctacc
tgcttagctgcgagtaaacaagcattggtcttagtccctgagatcggcttgacacctcaa
cttctaaccaacttccatgcccgcctcggaatacccgtgcatgccctgcactccaaattg
gcagacagcgaacgcgcccgcgtgtgggcgacggcacgatgtggcgaggcacgactggta
ctaggaactcgctcagcggtgttcacccccctacctcatgccggactaattatagtagat
gaggaacacgacacgagttacaagcagcaagacgggatacgttacaacgcgcgcgatttc
gcattgttgcgcggcaaggcactaaacgtaccggtcatcctcgggagtgccactccgtca
ctggaatcactgtacaacgcgcataacggacgctataagcacctccgcctcacctaccgt
gccggtcaagcgtatgcccctcaggtgcgcgtactagacgtgcgcaaaagaccactgaaa
gacggcctatcacccgaggtattaacaggaattaacgcaactttagcgcgtgatgagcag
gtactcgtattcaagaaccggtgcggctattcaccagtgttgctatgtcacgactgcggc
tggaccgctacctgtcagcagtgcagtacatcagtgcaccacacaccaatgactgtatac
agcggcggaacctacttacagtgccaccactgcaacgcacgccagccaatgccactatca
tgcccagactgcggcagtacagcgctacagccgcagggcataggcaccgaacgcctagaa
gctcgcctgattgaggctttccctaaacaccctgtggtgcgtatcgatcgcaacacaacc
cagcaccgcgacggactaaaaacccaattcaccaaactcggcaatgccgctggcatttta
gtaggcacccagattctagccaaagggcatcacctaccacgcttaacgatggtcgtggtc
gttggaatcgacgaaggcctattctcagccgacttccgcgccactgaaaagctctcccag
caactgatccaagttgctggccgcgctggccgtgctaaacatgccggagaagtctggcta
caaactcaccaccctgatcaccctctgttgcaaacactaatcaacggcggctaccacacc
tttgctaatacggagctacaacaacgccaagccgctgggttgccgccattcgcacacttg
gcactcctgcgtgctgaagcgaaagacaccacctcaacacaacaatttctcgccacggta
cgcaaacacatgccaaccaacaatgcagtcgaatgctacggcccaatgtcggctcccatg
ccgcgccgcgccggctacgagcgctaccaattattgctgtccagctcccaacgtaacgca
ctacaccgcacactcaatatcttgataccagcgattcattcactgccagaagcacgccga
gtccgctggtcgttagacgtggatccagttgatctttactaa
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