Xylella fastidiosa M12: Xfasm12_2240
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Entry
Xfasm12_2240 CDS
T00677
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
xfm
Xylella fastidiosa M12
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfm03021
]
Xfasm12_2240
Transcription machinery [BR:
xfm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Xfasm12_2240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
IF2_N
HTH_11
HTH_10
GntR
HTH_25
Phage_terminase
KORA
UCR_14kD
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
ACA13091
LinkDB
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Position
complement(2369427..2370293)
Genome browser
AA seq
288 aa
AA seq
DB search
MTRNTSVVLVGNNLPVPNALGSLEAYISAVHQISVLSVDEEQLLARRYRDQQDLDAAREL
VHSHLRFVVRVARGYSGYGLSLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAMHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSRTRLGWMNAEEVSAVARDLNVSEREVLEMES
RLSGRDIGFDAPEEDNAPLSPVGYLIANDGDPSQAYERGNSEETQLRLLQEGLSVLDTRS
RDIIQRRWLETDKKITLQELAEEYGVSAERIRQIEANALKKMKVLFAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaatacatcagtggtgcttgtgggaaacaacttgcctgttccaaatgccctc
ggttcgttggaggcatacatcagtgccgtgcaccagatctcggtactttcggttgatgag
gagcagctattggctcgccgttatcgtgatcaacaggatttagatgctgcacgtgagttg
gtgcattcgcacttgcgttttgttgttcgggtagcgcgcggttatagcggttacggcctg
tctttaggcgacttgatacaagagggtaatatcggtctgatgaaagctgtaaagcgcttt
gatccggatatgggtgtccgtttggtttcttttgcaatgcattggattcgcgctgaaatg
catgagtttattttgaagaattggcgcatcgttaaagttgctaccaccaaagcgcagcga
aagcttttttttaaccttcggaaatctagaacccgtctgggctggatgaatgccgaggaa
gttagtgcagttgctagggatcttaacgtctctgaacgtgaggtattggagatggagtca
cgtttgtcagggcgcgatattggtttcgacgcgccggaggaagacaacgctccgctatcg
cctgttggctacttgattgctaatgatggagatccttctcaagcttacgaacgtggtaat
agtgaggaaacccaattacgcctattacaggaaggtttgtctgtccttgatacccgttca
cgcgatattattcagcgtcgctggctggaaacagataagaaaatcacgttgcaagaatta
gctgaagaatatggagtttcagcagaacgtattcggcagattgaagctaatgcgcttaaa
aaaatgaaggtgctgttcgctgcttga
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