KEGG   Xylella fastidiosa M12: Xfasm12_2283
Entry
Xfasm12_2283      CDS       T00677                                 
Name
(GenBank) Type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
xfm  Xylella fastidiosa M12
Brite
KEGG Orthology (KO) [BR:xfm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xfm02048]
    Xfasm12_2283
Enzymes [BR:xfm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Xfasm12_2283
Prokaryotic defense system [BR:xfm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Xfasm12_2283
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD AAA_22 GIY_YIG_domain
Other DBs
NCBI-ProteinID: ACA13130
LinkDB
Position
complement(2427594..2430728)
AA seq 1044 aa
MAFLSEATLEQAVLDQLRLLGYSIEREENIGPDGYRPERASYDQVVLKQRFVDAVTRLNP
GLPPEARQDAIRKVTQSELPSLLEENRRIHRLITEGVDVEYYAQDGTLTAGNVALIDFDH
PQQNDWLAVNQFVVIADHYNRRPDVVLFLNGLPLAVIELKAPGSINATLIAAFNQLQTYK
EQIPALFNTNALLVTSDGMTARFGSLSADLERFMPWRTTDGTDIAPKGVPELATLIEGIF
EPHRLLDLLRHFTVFRKTDAGLAKIIAGYHQFHAVRQAINSTVAASSPQGNQQIGVIWHT
QGSGKSLLMAFYAGQLVKHPAMANPTLVVLTDRNDLDDQLFTTFSQCGDLIRQTPVQAQS
RDQVRKLLNRASGGVIFTTLQKFGDITEPLTTRRNVVVIADEAHRSQYGFKAKVDNKTGK
ISYGFAKYMRDALPNASCIGFTGTPIEADDVNTPAVFGNYIDIYDISRAVEDGATVPIYY
ESRLARIALDEAEKPQIDAEVNALTEADSEAEQERFKKKWSTVETLVGSDKRLALIAKDI
ITHCEDRLAALDGKAMVVCMSRRICVALYDHIVTLRPDWHSTDNKAGSLKIVMTGTASDP
QQWRQHIGNKARRDLLAERARDPKDPLKLVIVRDMWLTGFDAPCMHTMYLDKPMQGHGLM
QAIARVNRVFRDKPAGLIVDYIGIAQNLRTALQQYSKNDQQHTGVDEAQAIAVMMEKYQI
VRDMYHGYDYLTAMSGTPQERLAMMGGAIEWILNLQQQLAATAQTKEGKKEAHRRYQDAV
LALSKAFALASASDEARHIREEVGFFQAIRAALVKSADHSGGSEPQRDLAIQQIVSRAVV
STEIVDILAASGINSPDISILSDAFLAEIQQMQRKHLALEALRKLLNDRIRSRSTANLVQ
TKAFSERLEGAVARYHANAITTAQVLQELIQLAKDIRAARQRGEATGLSDEEVAFYDALA
ENESAVQMMGDHTLRLIAHELLMRLRENVSVDWAHRDSARARMRVLVKRILRKYGYPPDL
QNTAVQTVLQQAEAFSSQWSDSGP
NT seq 3135 nt   +upstreamnt  +downstreamnt
atggcatttttatcagaagccaccttggaacaagccgtgctggatcagctacgcctattg
ggctacagcatcgagcgtgaagaaaacatcggccctgatggctatcgtccggaacgcgcc
agttatgaccaggttgtactcaaacaacgcttcgttgatgccgttacacgtctcaaccca
gggctgccgccagaggccagacaggatgcaatccgtaaggtcacacagtctgagttgcca
tcattactcgaagaaaaccgccgcatccacagactgatcaccgaaggtgtcgatgtcgaa
tactatgcccaggacggtaccctgacagcgggcaacgttgcactcatcgacttcgaccac
ccccaacagaacgattggttggccgtgaaccagttcgtggttattgctgatcactacaac
cggcgtcctgacgtggtcctcttcttgaacggcttgccattggccgtgatcgaattgaag
gcaccaggaagtatcaatgcaaccttgattgcagccttcaatcagttgcagacctataaa
gagcagatcccggcactgttcaacaccaatgccctgctagtgacttctgacgggatgacg
gcccgcttcggctcgctgtcggccgacttagaacgcttcatgccttggcgcaccaccgac
ggcaccgacattgctccaaagggggtgccggaacttgcaacactgattgaggggatattc
gagccgcatcgcctgctcgacctactgcgccatttcaccgttttccggaagacggatgct
ggcttggcgaagatcatcgccggttaccaccaattccacgctgtacggcaggccatcaat
agcaccgtggctgcttcctcgccccaggggaatcaacagattggtgtcatctggcacacc
caaggttccggaaaaagcctactgatggctttctatgctggacaactggtcaaacacccc
gcaatggccaacccaacgcttgttgtactcacagatcgtaacgatcttgacgatcagtta
ttcaccacattctcacagtgcggtgatttaatccggcaaaccccggtacaggcccagagc
cgcgaccaggtgcggaaactcttgaaccgtgcatccggcggagtgatttttaccaccttg
cagaaattcggtgacatcacagaaccactgaccacacgacgtaacgtcgtcgtcatcgct
gatgaagcacaccgcagccaatatggcttcaaagccaaagtggacaacaaaaccggcaaa
atctcctatggcttcgctaagtacatgcgtgatgccctgcccaacgcatcttgcatcggt
tttaccggcacaccgattgaggccgacgacgtcaataccccagccgtattcggcaactac
atcgacatctacgacatcagccgtgcggtcgaagatggtgcgaccgtgccgatctactac
gaatcgcggctggcacgtattgcactggatgaagccgagaaaccgcagattgatgctgaa
gtcaacgcactgaccgaagccgattccgaggccgagcaagagcgcttcaagaaaaaatgg
tcaacggtcgaaaccttagtcggcagtgataaacggcttgctttaatcgccaaggacatc
atcacccattgtgaagatcgcctagccgctctggatgggaaggcgatggtggtctgtatg
agccgtcgtatctgtgtcgccctatacgatcacatcgtgacactgcggcccgattggcac
agcaccgataacaaggccggatcgctcaaaatcgtcatgaccggcacggccagtgatccg
cagcagtggcgacagcatatcggcaacaaagcccggcgtgatctgctggccgaacgtgcc
cgtgaccccaaagacccactcaaactagtgattgtccgggatatgtggctcactggtttt
gacgccccctgcatgcacaccatgtaccttgacaagccgatgcaagggcatggattgatg
caggccattgcacgggtgaaccgcgtgttccgcgacaaacccgccggattgatcgtggac
tacatcggcatcgcacaaaatctcagaacggccctgcaacagtattcgaagaacgatcag
caacacaccggtgttgatgaagcacaggccattgcagtcatgatggagaaataccagatc
gtccgggatatgtaccacggctacgattacctcaccgcaatgagtggtaccccacaagag
cgccttgccatgatggggggagccattgagtggatactcaatcttcagcagcaactggca
gccacagcacagaccaaagaaggcaaaaaagaggcccaccgccgctatcaagatgctgtg
ttagcgttgtctaaggcgttcgccctggcatcggcctccgatgaggcccgccacatccgt
gaagaagtcggcttcttccaggcgatccgtgccgccctcgtcaagagcgccgatcattcc
gggggtagcgaaccgcaacgcgacctggccatccagcagatcgtgagccgagccgtcgtc
tcgacggagatcgtcgatatcctggctgcttctggaatcaacagcccagatatttccatc
ctgtccgacgcatttctggctgaaattcagcagatgcaacgaaaacacctcgccttggaa
gccttgcgcaagctgttgaacgaccgcattcgttcccgcagcaccgctaacctcgtgcag
accaaggccttctccgagcgcctggaaggtgctgtggcgcgctaccacgccaacgcgatc
accactgcccaggtgctccaggaactgatccaattggccaaagacatccgtgctgctcgc
cagcgcggcgaagccaccggattgtctgatgaagaggttgccttctacgacgcactggcc
gaaaacgaaagcgctgtacagatgatgggagatcacacactccggctgatcgctcacgaa
ttactcatgcgcctgcgcgaaaacgtctcagtggattgggcccatcgtgactccgcccgt
gcccggatgcgtgtcctagtgaagcgcatcctgcgcaagtacggctacccgcctgatcta
cagaacacggctgtgcagaccgtcctccagcaggccgaagccttctcgtcccagtggagt
gattctggaccctaa

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