Xylella fastidiosa M23: XfasM23_0153
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Entry
XfasM23_0153 CDS
T00692
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xfn
Xylella fastidiosa M23
Pathway
xfn03030
DNA replication
xfn03430
Mismatch repair
xfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XfasM23_0153
03430 Mismatch repair
XfasM23_0153
03440 Homologous recombination
XfasM23_0153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfn03032
]
XfasM23_0153
03400 DNA repair and recombination proteins [BR:
xfn03400
]
XfasM23_0153
Enzymes [BR:
xfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XfasM23_0153
DNA replication proteins [BR:
xfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XfasM23_0153
DNA repair and recombination proteins [BR:
xfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XfasM23_0153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACB91610
UniProt:
B2I6R8
LinkDB
All DBs
Position
complement(208935..212516)
Genome browser
AA seq
1193 aa
AA seq
DB search
MSTSSFVHLHIHTEFSLADSTIRVPEKPEQAHPKKAKQANLLSRAVELGLPALAVTDLNN
LFALIKFYKAAETVGIKPISGADLLIAEPEHPPWGMTLLCRDHAGYLNLSQLISRGWLEG
HRPEGGVAVHPDWVRDHHKNLFALIGRHSLAGQLLAKGRADLAEQQLADWQHVFGDGLHL
ELTRTGRDGEEPFNQFALQVAGIRGIPVIASNDVRFLVQSDFLAHEARVCIASGRMLDDP
KRPRTYSEQQYLRSSEEMAALFADIPDALDNTRTLAQRCNIEMRLGTYFLPNYPVPNDET
LDSWIRKQSHEGLEARLLKHPLAPGQTREDYVTRLEFELDTIIKMGFSGYFLIVADFIQW
GKQQGIPIGPGRGSGAGSLVAWALLITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMER
RDEVISYVARKYGRERVSQIITYGTMAAKAVVRDVGRVLGFPYGLVDSVAKLIPSTLGIT
LKDAMGEGETNDNASAELIQRYQAEEDVQELLNLARQLEDLTRNAGKHAGGVVIAPNPLT
EFCPLFAEHDENGRGKNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINKRHARA
CIDPVDITALPLDDIPTYKDVFASGNTSAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPEFTARKHGVQETIYPDPRTKNILKDTYGIMVYQEQVMQMAQIVGGYSLGSA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGMDAVKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEARNLNLKVLRPNINHSAYMFEA
THADTIQYGLGAIKGVGQSVCEAIVKERLHYGPYTSLLDFCTRVTSAKLNRRALEAMIHA
GALDELGKNRASVMLQLPEVIKATEQMSRERESGQNSLFGNADPGTPVIQLDLPECEEWP
LTRMLNGERETLGLYFSGHPFDPYRKQVKELVGCDLNTSALERILGSQQRGNGEKRTWQP
EVNTILAGLVVSVRRKGDSQVFVQLEDGRGRIECSAFSDALAEFGHLLTRDRILIVKGGL
REDEFNGGYSLRIRQCWDYAQLCTDYAQRLLLRVDLRTSHAWERIDAILARYRPGNTPLR
LDLLLNSTHGPVAGTLDLSGGQSVRIEQSLLDKLQKDPAVSKLKVKYTPPWVQ
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgtcttcatttgttcatctccatattcacactgaattctcgttagcggattca
acgattcgcgtgcccgagaaaccagaacaggctcacccgaaaaaggccaaacaagccaac
ctactcagcagagccgttgaactcggactgccagcgctggcagtaacggatctgaacaac
ctattcgcactgattaagttctataaggccgctgaaaccgtcggcattaagccgatcagc
ggtgctgatctcctcatcgccgaaccagagcaccccccgtggggaatgacattgctgtgt
cgggatcacgctggctacctgaatctatcgcaactgatcagccgcggttggctggaaggt
caccgccctgaaggaggagtggccgtgcacccggactgggtccgtgaccaccacaaaaat
ctatttgccctaatcggacgtcacagcctggccggacagctgttggccaaaggtcgcgct
gatttggccgaacagcaactggcggactggcaacacgtattcggtgacggcttgcacttg
gaactcacgcgcactggacgcgatggcgaagaaccattcaatcaatttgccctccaagtc
gctggcatccgcggcataccggtgattgccagcaacgacgttcgcttcctggtacaaagc
gactttctggcacacgaggcgcgcgtctgtatcgcatctggacgcatgcttgatgatccc
aagcgaccacgcacttacagcgaacaacagtatctgcgttcctccgaagagatggcagca
ctctttgctgacatcccagacgccttggacaacacccgcaccttggcacaacgctgcaat
atcgagatgcggctggggacctatttcttacctaactaccccgttcccaacgacgaaacg
ttggacagttggatccgcaaacagtcgcatgaaggtctggaagcacgcctactgaaacat
ccattagcaccagggcagacacgtgaagactacgtgacccgtctggaatttgaactggac
accatcatcaagatggggttctccggttacttcctcatcgtggccgacttcattcaatgg
ggtaaacaacagggcatccccatcggcccgggacgcgggtctggtgccggctcactggtc
gcgtgggcgttactgattactgacctggaccctctgccatacaacttgttgtttgaacgc
tttcttaatcccgaacgcgtatcaatgccggatttcgacatcgacttttgtatggaacgc
cgtgatgaggtcattagctacgtcgcacgcaaatacggtcgcgaacgggtcagtcaaatc
attacctacggcaccatggctgcgaaagcagtggtgcgcgacgtcggtcgcgtattgggt
ttcccatatggcttggtcgacagcgtcgctaagctgatcccgagcacccttggcatcacc
ctgaaagatgcgatgggcgaaggcgagaccaacgacaacgcctcagcagaactgatacaa
cgctatcaagccgaggaggacgtacaggagctgctcaacctggcacgccaactggaagat
ctgacccgcaatgctggcaagcacgctggcggtgtcgtgatcgcaccgaacccactcact
gaattctgcccactctttgcagaacacgacgaaaacggacgcgggaagaaccccgtcacc
caattcgacaaaaacgacgtggaagaagtcggcttagtgaaattcgacttcctcggccta
cgcacactcaccatcattgattgggcggtcaaggcaatcaacaaacgccacgcccgcgcc
tgtattgatccggtggacatcaccgcacttccactggacgacatcccaacttacaaagac
gtttttgcatcagggaacacgagcgcagtattccaatttgaatcctcgggcatgcgccgc
ctcctcaaagatgcacgcccagaccgcttcgaagatctcatcgcactggtgtcactgtat
cgcccaggccctatggacttgatccctgaattcaccgcgcgcaagcacggagtgcaagag
accatctatcccgacccgcgtacgaagaacattcttaaagacacctacgggatcatggtg
taccaggaacaagtgatgcaaatggcccagattgtcggcggttactcgctgggcagcgct
gacctgctacgtcgcgcgatgggtaaaaaagtacctgccgagatggccaagcaccgcgag
atcttccgcgagggtgccgccaaaggtggcatggacgcggtcaaagccgatgaaatcttc
gacctcatggagaaatttgccggctatggttttaataaatcccacgccgctgcatacgcg
ctggtcagttatcaaaccgcttggctcaagcgccattatcctgctgaattcatggcagcc
acgctgtcctcggacatggacaacaccgacaaagtcgtcggcttcctcgacgaggcacgt
aacctcaatctgaaggtgctgcgaccaaacatcaatcactcagcctacatgttcgaggca
actcacgccgacacaatccaatacggcctgggcgctattaaaggtgtcggccaaagcgtc
tgcgaggcaatcgtcaaagaaaggttgcactacggtccgtatacgtcactgctcgatttc
tgtacccgggtcacctcagccaaactcaaccgacgtgcactcgaagcaatgatccatgct
ggcgcactggacgagctaggtaaaaatcgcgcctctgtcatgctgcaactgccagaagtc
atcaaagcaacggaacaaatgtccagagaacgcgagtccgggcaaaactcgcttttcggc
aacgcagaccccggcacaccagtcatccaattagatcttccagaatgcgaagaatggccg
ctaacacgcatgttgaacggagagcgggagacgctgggcctttatttcagcggccaccca
ttcgacccataccgtaagcaagtgaaggaacttgttggttgcgatctaaacaccagtgcg
cttgaaagaattctgggttcccaacaacgtggcaacggtgaaaagcgtacttggcagcca
gaggtgaacaccattctcgcaggattggtcgtcagtgtgcgccgtaagggagacagccaa
gtctttgtacaacttgaagacggacgcggtcgaattgaatgcagtgcgttctccgacgcc
ctggcagagttcggccacctgttgacccgtgaccgcatactgattgtcaaaggtggtctg
cgagaagatgaattcaacggcggctacagcctacggatccgtcaatgctgggattacgcg
caactctgtacagactatgcgcaacgcttgttgctacgcgtggacctacgcacctctcac
gcatgggaaagaatcgatgccatcctggcacgctatcgccccggcaacaccccattacgt
ctcgatctgttgctgaattcaacccacggccccgtcgccggcacgctcgacttgagtggc
ggccaatctgtacgtatcgaacaatcactcttggataaactgcaaaaagatcccgcggta
tctaagcttaaggtcaaatacacgccaccttgggtgcaatga
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