Xylella fastidiosa M23: XfasM23_1123
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Entry
XfasM23_1123 CDS
T00692
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xfn
Xylella fastidiosa M23
Pathway
xfn03030
DNA replication
xfn03430
Mismatch repair
xfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XfasM23_1123
03430 Mismatch repair
XfasM23_1123
03440 Homologous recombination
XfasM23_1123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfn03032
]
XfasM23_1123
03400 DNA repair and recombination proteins [BR:
xfn03400
]
XfasM23_1123
Enzymes [BR:
xfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XfasM23_1123
DNA replication proteins [BR:
xfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XfasM23_1123
DNA repair and recombination proteins [BR:
xfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XfasM23_1123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
ResIII
AAA_18
Mg_chelatase
AAA_7
AAA_30
PIF1
AAA_2
nSTAND3
TsaE
AAA_19
ABC_tran
Rad17
AAA_assoc_2
AAA_24
SKI
Motif
Other DBs
NCBI-ProteinID:
ACB92551
UniProt:
B2I5A8
LinkDB
All DBs
Position
complement(1270980..1272611)
Genome browser
AA seq
543 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALESGRLHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGRCTACLDIDVGRYIDLLEIDAASNTGVDDVREMIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
EQIQRQIAKILTAEQITADDTAIIELSKAADGSLRDGLSLLDQAIAYAGGTLREGAVRDM
LGTVDRTQVEVMLAALIAGDGDRLLRVIATLAEFSPDWGGVLEALAEALHRIQVQQLVPS
VVFAGDGLNVALLAEQTQPEVVQLWYQMAINGRHDLHLAPSPRVGFEMAVLRMLAFRPVP
VVVPGMVSTEGQGQSVNAPLMASVGRNAHGANGYTMSQSRSDLQKVRVGSLDGKITDVGQ
WLALVERIELSGPSKQLAAHAAFVSHENNVLSLALAPEFEYLQSTRSVADLTQGLTRLLG
QAPEVKIEARNIQVETLHERTYRQKSERQQLAEEAFMSDHVVQHLIYQQAAKVVTDSIRP
YDE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcttgttcttgctcgcaaatggcgccccaagcggtttgctgagctggtgggt
caagagcatgtggtccgtgcgctgagtaatgcattggaaagtggccgtctccatcacgcc
tttctgtttactggcacccgtggtgtaggcaaaacgacgattgcgcgtatcttcgctaaa
tcattgaactgcgagcagggtaccagtgccgatccatgtggccggtgtacagcctgcttg
gatattgatgttggtcgctatattgacttgctggagatcgacgctgcctccaataccggt
gtggatgatgtgcgcgagatgatagaaaacgcgcaatacatgccctccagaggcaagttt
aaggtctacctgattgatgaagtgcatatgctctctaaagcagcgtttaacgcgctgctg
aagacgctagaggagccaccgccacacgtaaaatttcttctggcaacgactgatcctcag
aaattgccggtgactgtgttgtctcgctgcttgcagtttaacttgaagcgcttggatgag
gaacagatccagcgtcaaatcgctaagatcctcactgctgagcaaatcacagccgacgat
acggcgatcatagagctttctaaggctgctgacggttcattacgcgatggtttgtctttg
ctggaccaggccattgcttatgctggagggacgttacgcgagggcgcagtacgtgacatg
ctcggtacggttgatcgtactcaggttgaggtgatgttggctgcattaatcgcaggtgac
ggtgatcgactattgcgggtgatagcaaccttggctgagttttcgccggactggggcggg
gtgttggaggccctggctgaagctttgcacaggattcaggtacagcaactagtgccttcg
gtggtgtttgcaggtgatggattaaatgttgccttattggccgaacaaacacagccggag
gttgtgcaactttggtaccagatggcaatcaatggacgtcacgacttacatttggcaccg
agtccacgtgtaggatttgagatggcagtgctgcggatgctcgctttccgacctgttcct
gtggttgtaccgggtatggtttcgactgaggggcaggggcagagtgttaatgccccacta
atggcgtctgttggtaggaatgcacatggggctaatggatatacgatgtcccaatcccgt
tctgatctccagaaagtccgagttggttctttggatgggaagatcactgatgttgggcaa
tggcttgcgttggtcgagcgcattgagttaagtggtccttctaagcaattggctgctcat
gccgcttttgtctctcatgagaacaacgtcctttctttagccttagcccctgagtttgaa
tatctacaatcgacacgttctgtggccgatttgacccaggggttgacccggttgctgggt
caggcccccgaagtgaagattgaggccagaaacattcaagttgaaactcttcatgagcgc
acctatcgtcagaagagtgagcgccaacagttggccgaagaagccttcatgagcgatcat
gtggtacagcatctgatctatcagcaggctgccaaagttgttaccgattccatacgccct
tacgatgagtaa
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