Xanthomonas fragariae: BER92_01060
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Entry
BER92_01060 CDS
T04667
Name
(GenBank) pathogenicity protein
KO
K09800
translocation and assembly module TamB
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfr02000
]
BER92_01060
Transporters [BR:
xfr02000
]
Other transporters
Pores ion channels [TC:
1
]
BER92_01060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
US30
Motif
Other DBs
NCBI-ProteinID:
AOD13581
UniProt:
A0A1Y6HGP7
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All DBs
Position
238124..241981
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AA seq
1285 aa
AA seq
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MSAPTPLPAPRRERFYRRRRFWAGSGLTVLGLALVALIAVYWLLQTVAGRDVLLAQVVAR
LPVGATFTYGKVEGPVAGPLTLRDVDFRYQDIHFTAERVYLEPELRPLLGRKLQLDAVQV
SNATLNLGKSDEPFTLPSWPESLPQINVPLAIQADKIDVENLRITQLQQPMIVLHKVQGG
LDAATGELRTRDLVVDTDMGDFRLHGDYLPNDDYRADLTATAVLPAARGRTPASLGLVAR
GDLDKMEVAIAGRAPAPLHASLVFTGRDDPTWAFKAVTAALDTSLLLPAADGQATAPAIP
IALNLQASGKGGNADLHGSVEQGELSATLQPSHISLRDQVLTVEPLLIDTLEGRTQLRGT
ADFRDTQNPSFRFAVNASGLRFTPTADPATPDAPLVPVKLTDARLGVAGTLKAWAAIGRA
TLERDGQQAELVFDSRGNDQRAQLKHVQAKTPGGLLDLTGEVGWTPELRWDVSAQLSKFD
PGYFAPGWNGNLSGKIASKGRQLPAPAGGVSPGLEATADIPSLTGQLRQRALSANGKFAL
RGEQGEGELQLALGNSRINAKGKLGDQLDIAAQLQPLQLDDLLPGATGIVRGQLQVSGRR
DAPDITADIAGNGLRWNDYSAQSISLRGRLPWRGSDGQLALQGTAIEAGLVLDSVHVQAR
GAVEALRLDADIVNSMASVALQGDVRRNGERWQGQIATLRIAPAKGDAWALRRPAQFSTD
GAAFTLSDTCVSAATGGALCANANWPREGMVVHADALPLSLVQPWLPKQEGRQIYLRGEL
SLDGSFKPRGNAWEGAFRIASPEGGIRLGQTRYAAVAGNPNRGELLRYDQFSVQADFTPQ
QIQAKLGVGFQGAGFVDAKFNTGWDAYAPLNGELYLNMSRLYWLELVVADVVQPKGLVEG
HVSLHGTRDKPLLGGDATLSDFTAEYPSMGLTLSQGKGRFDALPDGSAKITAAAKSGEGT
LTIDGGLSWFGTTTPLLLNIRGENVLAYNTSELRIIANPDMQFGITGNTMQLRGKVTVPE
ADIDLERLDRGTSVSEDVVVLDPVDPEATPSSPLDMDLAIVLGDKVNMSGFGLKGGLSGQ
IQIRARPGREMNANGGLDVRGRYKAYGQDLTISRGQLTWNSNIVSDPRVSLRAERKIGDV
TAGIDVSGRAESPRADVWSEPAMSQSEALSYLVLGRGLSTASSDETQQVSAASAALSAGS
SLIASQIGAKLGLDEAGVSESSTLGGSVVGFGKYLSPKLYVGYGVSMVGSGSVLTLKYLL
SRGFDVEAESSSVETKGSVNWRREK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcacccacgccgctccccgcaccgcgccgcgagcgtttctatcgccgacgccgg
ttctgggcgggctccggcctgaccgtgctgggcctggcgttggttgccttgatcgcggtg
tattggttgctgcaaaccgtcgccgggcgcgatgtgttgctagcgcaggtggtggcgcgt
ttgccggtgggcgccacatttacctacggcaaggtcgaaggcccggttgccggcccgctg
accttgcgcgacgtcgatttccggtaccaggacatccacttcaccgctgagcgcgtgtat
ctggagccggagctgcgcccgctgctcggtcgcaagctgcaactggatgcagtgcaggtc
agcaatgccacgttgaatctgggcaagagcgatgagccgttcacgctgcccagctggccc
gagtcgctgccgcagatcaatgtgccgctggcgatccaggccgacaagatcgacgtggag
aatctgcgcatcacccaactgcagcagccgatgatcgtcctgcacaaggtgcagggcggg
ctggacgccgccaccggcgagctgcgcacgcgcgatttggtagtcgacaccgacatgggc
gattttcgcctgcatggcgattatcttcccaacgacgattaccgcgccgatctcaccgct
accgccgtgttgccggccgcgcgcgggcgcacgccggccagcctggggctggtcgcacgc
ggcgacctggacaagatggaggtggccatcgccggccgcgcaccagcaccgctgcacgcc
agcctggtgttcaccgggcgcgacgaccccacctgggcgttcaaggcggtgacagcggcg
ctggatacctccctgttgctcccggccgcagacgggcaggccactgcgccggccataccg
atcgcgctgaacctgcaggcttccggcaagggcggcaacgccgacctgcacggcagtgtc
gaacagggcgaattaagcgccacgctgcagccctcgcatatcagcctgcgggatcaggtg
ctgaccgtcgaaccgttgctgatcgataccttggaaggccgcacccaattgcgcggcacc
gccgatttccgcgacacgcagaatccgagcttccgtttcgcggtcaatgccagtggcttg
cgtttcactccgactgcagatccagccactccggatgcgccgctggtgccggtaaagctg
accgacgcgcgtctgggcgtggccggcaccttgaaggcgtgggcggcgatcggccgcgcc
acgctggaacgcgatgggcaacaggccgagttggtgttcgacagccgtggcaacgatcag
cgcgcgcagctcaaacacgtgcaagccaaaacaccaggcggcttgctggatctcaccggc
gaggtgggctggacgccggagctgcgatgggatgtcagcgcgcagctgtccaagttcgat
ccgggctatttcgcaccgggctggaacggcaatctgtccggcaagatcgcctccaagggt
cgccagctgccggcgccggccggcggcgtgtcgccgggcttggaggccactgcggatatt
ccgagcttgaccggccaactgcggcagcgcgcgctgtctgcaaatggcaaattcgcgttg
cgcggcgagcaaggcgagggtgaattgcagctggcgttaggcaatagccgcatcaatgcg
aagggcaagctcggcgaccagctcgatatcgccgcgcagttgcagccgctgcaactggac
gacttgctgcctggcgccaccggtatcgtgcgtgggcaactgcaggtcagcggccgtcgc
gacgcacccgacattaccgccgacatcgccggtaacgggctgcgctggaacgattacagc
gcgcagagcatcagcctacgtggccggctgccgtggcgcggcagcgatggacaactggca
ttgcaaggcaccgccatcgaagccggcctggtactggacagcgtccacgtgcaggcacgc
ggtgcggtggaggcgctgcgcctggatgccgatatcgtcaacagcatggccagcgtcgcc
ttgcagggcgatgtgcgccgcaacggcgagcgctggcagggccaaatcgccacgctgcgt
atcgcaccggccaagggcgatgcctgggcactgcgtcggccggcgcagttcagcaccgac
ggcgcggcatttaccttgtccgatacctgtgtgagcgccgccactggcggcgcactgtgc
gccaacgccaattggccgcgcgagggaatggtggtgcacgccgatgcgctgccgctgtcg
ttggtgcaaccgtggctgcccaagcaggaaggacgacagatttatttgcgcggcgagctc
tcgctggatggcagcttcaagccacgcggtaatgcgtgggaaggcgcgttccgtattgcc
tcgcccgaaggtggtattcgtctcggccaaacgcgctacgccgcggtcgccggcaatccc
aatcgtggcgaattgctgcgctatgaccaattcagtgtgcaagccgatttcaccccgcag
cagatccaggccaagctcggtgtcggcttccagggtgcgggctttgtcgatgccaaattc
aacaccggttgggacgcgtacgcaccgctcaacggcgagctgtatctcaatatgtcgcgg
ctgtactggctggagctggtggtagccgatgtggtgcagcccaagggcctggtcgaaggc
catgtgagcctgcatggcacccgcgacaaaccgctgctcggcggcgatgcgaccttgagc
gacttcactgccgaatacccgtcgatgggcctgaccctgagccagggcaagggccgcttc
gacgcgttgccggatggctcggccaagatcaccgccgcggccaagtcgggcgagggcacg
ctcacgatcgatggcgggctgtcgtggttcggcaccaccacaccgctactgctcaatatc
cgcggcgaaaacgtgctggcctacaacaccagcgagttgcgcatcatcgccaaccccgac
atgcagttcggcatcaccggcaacaccatgcagctgcgcggcaaggtcaccgtgccggaa
gccgatatcgacctggaacgcctggatcgcggcacctccgtctccgaagacgtggtggtg
cttgacccggtggatccggaagcaacgccgtcctcgccattggatatggacttggccatc
gtgctcggcgacaaagtcaacatgagcggcttcggcttgaagggcgggctgagcgggcag
atacagatccgcgcgcgcccgggccgcgaaatgaacgcaaacggcggactggatgtacgt
ggtcgctacaaggcgtacggccaggatctgaccatcagccgcggccagctgacctggaac
tccaacatcgtctccgacccgcgcgtgagtctgcgcgcagagcgcaagatcggcgatgtc
accgccggtatcgatgtcagcggacgcgccgaatcgccacgtgcggacgtatggtcggag
ccggccatgtcgcagtccgaagcgctgtcttacctggtgctcggccgcggcctgtccacc
gccagcagcgacgaaacccagcaggtcagcgccgcctcggccgcactctcggcaggcagc
agcctgatcgcctcgcaaatcggtgccaagctcggcctggacgaagccggcgtcagcgaa
tccagcacgctcggtggatctgtcgtgggcttcggtaaatatctctcgccgaaactttat
gtcggctacggcgtctcgatggttggcagcggctcggtgctgacactcaaatacctgctc
agccgaggcttcgacgtggaagccgaatcgagctcggtggaaaccaagggctcggtgaac
tggcggcgcgagaaatag
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