Xanthomonas fragariae: BER92_01170
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Entry
BER92_01170 CDS
T04667
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BER92_01170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_01170
Enzymes [BR:
xfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BER92_01170
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BER92_01170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
SpnB_Rossmann
Motif
Other DBs
NCBI-ProteinID:
AOD13599
UniProt:
A0A1Y6HFD3
LinkDB
All DBs
Position
273239..274024
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AA seq
261 aa
AA seq
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MKIASWNVNSLNVRLPHLQQWLGTFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK
TYNGVAILSRLPALDVQMGIPGFDDVQQRVIAATVDGVRIVNLYVVNGQDVGTDKYAYKL
RWLAAVHDWLAQELQTYPQLVVLGDFNIAPDARDVHDAAVWDEHHILTSTAERAALQKLL
AVGLHDAFRLHHDEAEQFSWWDYRQAGFRRNLGLRIDLTLVSDALRARVVESGIDREPRT
WERPSDHAPAWVQLAAAEAGA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcctcctggaacgtcaactcgctcaacgtgcgcctgccgcacctgcaacag
tggctgggcacgttcgcgcccgacgtggtcggcatccaggaaaccaagctggaagaccac
aaatttccagatgcggcgctcgcggcgttgggctatcgcagcgtgttttgcgggcagaag
acctacaacggcgtggcgatcctgtcgcgcttgccggcgctggacgtgcagatgggcatc
cccggtttcgatgacgtgcagcagcgcgtcatcgctgccactgtcgatggcgtgcgcatc
gtcaacctatacgtggtcaacggccaggacgtgggtacggacaaatacgcctacaagctg
cgctggctcgccgcggtgcacgattggctggcgcaggaactgcaaacgtacccgcaactg
gtcgtgctgggcgacttcaacatcgccccggatgcgcgcgatgtgcacgatgcggcggtg
tgggacgagcaccacatcctcacgtccactgccgagcgcgccgcgctgcagaagttgctc
gcggtgggcctgcatgatgcgtttcgtctgcaccacgacgaggccgagcagttcagctgg
tgggattatcgccaggctgggttccgccgcaatctcggcctgcgtatcgatctgaccctg
gtgtcggacgccttgcgcgcacgcgtagtggaatcaggcatcgatcgcgagccacgcacc
tgggagcgccccagcgatcacgcaccggcatgggtgcagcttgcggcagcggaggccggc
gcatga
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