Xanthomonas fragariae: BER92_02460
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Entry
BER92_02460 CDS
T04667
Name
(GenBank) type III effector protein
Organism
xfr
Xanthomonas fragariae
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AOD16465
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Position
541617..547421
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AA seq
1934 aa
AA seq
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MARDNELVRRIVGCKLALPFLDGSESPEANAQWLDKYLQMLANARPAAGVTQRDLDHCTD
LAAKYLSETGWFDGAPLKKLAHVGNKLSKHPKQPACMQAIAWIAAQVEQADGRLGLNGRE
LALLLNAFAKNTNSGGCELAAARLARYLQREQRIRQSLNAQGFSLALNAFSKWFDHPDCR
SMAHSLAAQLADDRRLRNELNPQEVGNALNALSKWPDAQDCKTAANVLASRLAKEPKLRN
ALDPQGVANALNALSKWPDTPACQAAANALARRLVDNDPRLRNALNPQEVANALNALSKW
PDTPDCEAAARALAWRLVDDDPRLRNALDPQHVASALNALSKWPDTPVCKAAANALAWQL
ADDNPRLRNAFDPQGVANALNALSKWPDTPDCEAAARALALRLANERGLRNALNPQEVAN
ALNALSKWPDTPACTKAIDALAGRLAADHDLRNALKPQNVTNALNALSKWPGAPDCKAAA
TALASRLADDAGLRNALDPQHVANALNAVSKWPDTPDCETAATALASRLVDDDSALCNAL
NPQHVANALNAVSKWPDTPDCETAASALASRLVDDAGLRNALNPLGVANALNALSKWPGR
ASCEKAIDALAGRLATDHDLRHALEVQDVALSLNALSKSLGGAACRQAALLLAERPGSAE
LPWQQFDMLGLAQLGNALSRLLRVDEEEFQTLGSDKLKALAGHLELHRARFESASVSEIG
LIFKALSSAQLHCQMRPLARPALERVAALMHDDGLRATNLEGLGSLCMGLLPLIRSPELT
PRHRSHALSVFNTLQPIVERKIALYLTVGGSPASAQTEQHATRCPALTFFQVLKAYAVVS
RQWKPRHVQGARQELHQRREQLAQWVDQTLERTREAIEADLGEMSWNLIAQIEAGDQVFD
ALDRRMAKEAPRIAQAHPPSRFDLGAGRLGMRSAPGQPVAPAPGTGSTTHIVVDLRGKQV
STNATETDKPYSLFTRLTGLPLVEVQLPGSISTFMLARTLTYQGQPWRFDMFGGSRATRG
HLSRPSDLLSGASASPSLLPAIRYADTVPGSSLMKLITKLAPQREDWSRMQRSLLEMVPS
DHVVEGTLRLGFFDDVSGPAHPFKPTAPDGRPLALCPNDGCGFLKLEVAQRIPAFRAYFS
AWEAVQAGRASQAQRDLLAKDKGPTRLAPQALQHFPRDQAALQEAHEAMQRRLQALPPEL
SQLVLYELATSGGYEGQRVRAVPSADNQVHLPRERSQAFDAAGGALLIGKPPYDKENLLP
VPQEYVATAAQGDATAEFLSQCFGIQYSYTGFDDSAGDAAGSDPAMLHSKGMLIVVPAQN
WPAQFADVDLACSKEDLKTLSRWTAGRDRSAVPQDMLSTGSLRLKDIVEPGRMGALPIPE
LRKRNMDTDGDDAFVYAGYPRLAELIAREMDDRAARRGQPRSFKPPKTATPAIDPDSGHY
QAGRLSEIMSLQRGGQIMGAASTLAARFMAQPDQLRKAMARKMMFGTYDGIERDLRNGLR
QVLDGETTDREVLLAQLRAQAHEAISRAHMPEAREVAELLHAQLLELELATARSAEAPGL
PDALASAETPRLPDALAEAFPTLARAYMAAPDADARLRAILDNYPVCRLSHAQFPEGQPG
FIPNEPELSMRNLFTIAIKVGTDALKSDTGTALFAKIVESCERSERAFAERVRSVPYGKT
TARAMHEGRFDAEQTKVLLQNMPTMAAGVMQDALHSLQQAGLIDPPPPPAERLRAVQHED
IVRAAEALRTRAGEMEPVITKMLIGAAKLHGGHLEGMGHKFKSPGSLAEKFRQQIALKHK
TLEEAAACINDALRYSVVLEPQHFTAGLRGVLASLDNQGHVRVKLLNLFTRQRQAFKAVN
VTLRSPEGALWEIQFHTPDTFKLKEKFHDVYKESFALQLKSASQVDQHQLQASAQAAFSG
VNAPPGCEEIDDWK
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggacaacgagctggtgcgtcgtatcgtcggctgcaagctggccttgcccttc
ctggatgggagcgaaagcccggaagccaatgcgcagtggctcgacaaatatcttcagatg
cttgccaatgcaaggccggccgcaggcgtaacgcaacgcgatcttgatcattgcaccgac
ctcgcggcgaagtatctctccgagaccgggtggttcgacggtgcaccgctgaaaaagctg
gcccatgtgggcaacaagctgagcaagcacccgaaacagccggcgtgcatgcaggcaatt
gcttggatcgccgcacaggtggagcaggccgatggtcggttgggtctgaatggccgcgaa
ttggccctgttactgaacgccttcgccaagaacaccaacagcggtgggtgcgagctcgcg
gcggctcgcctggcacgttacctgcagcgtgaacagcgcatccggcagtctttgaacgcg
cagggcttcagcctggcactcaatgccttcagcaagtggttcgatcacccggactgccgg
tccatggcgcactcgctcgccgcgcagctggccgacgatcgccgtttgcgcaacgaactc
aacccgcaagaagtgggcaacgcgttaaacgcactgagcaaatggcccgacgcgcaggac
tgcaagaccgccgccaacgtactggcttcgcggctggccaaggagcccaaattgcgcaac
gccctcgacccgcaaggcgtggccaacgcgttgaacgccctgagcaaatggcccgacacg
ccggcctgccaggccgccgccaacgcgctggcccggcggctggtcgacaacgatccccgt
ttgcgcaacgctctcaacccgcaagaagtggccaacgcgttgaacgccctgagcaaatgg
cccgacacgccggactgcgaggcggccgcccgcgcgttggcctggcggctggtcgacgac
gatccccgtttgcgcaacgcgctcgacccgcaacacgtggccagcgcgctcaacgccctg
agcaaatggcccgacacgccggtctgcaaggccgccgccaacgcgctggcctggcagctg
gccgacgacaatccccgtttgcgcaacgcgttcgacccgcaaggcgtggctaacgcgctc
aatgcactgagcaaatggcccgacacgccggactgtgaggccgccgcccgcgcgctggcc
ctgcggctggccaacgagcgcggtttgcgcaacgccctcaacccgcaagaagtggccaac
gcgctcaacgcactgagcaaatggcccgacacgcctgcatgcacgaaggccatcgacgcc
ttggctgggcggctggctgcagaccacgatttgcgcaacgccctcaaaccgcaaaacgtg
accaacgcgctcaacgcactgagcaaatggcccggcgcgccggactgcaaggccgccgcc
accgcgctggcttcgcggctcgccgacgatgccggtttgcgtaacgccctcgacccgcaa
catgtggccaacgcgttgaacgccgtgagcaaatggcccgacacgccggactgcgagacc
gccgccaccgcgctggcctcgcggctggtcgacgacgattccgctttgtgcaacgccctc
aacccgcaacacgtggccaacgcgctcaacgccgtgagcaaatggcccgacacaccggac
tgcgagaccgccgccagcgcgctggcctcgcggctggtcgacgatgccggtttgcgcaac
gctctcaacccgctaggcgtggccaacgcgctcaacgccctgagcaaatggcccggacgc
gcgagctgcgaaaaggccatcgacgccttggccgggcggctggctacggaccacgatttg
cgacacgccctggaagtgcaggacgtggccttgtcgctcaatgcgctaagcaaatcgctt
ggaggggctgcctgtcgtcaggcagcgttgctgctcgccgagcgcccaggctcggccgag
ttgccgtggcagcagttcgacatgctcgggctcgcccagttgggcaacgcgctgtcccgc
ctgctacgggtagacgaggaagagtttcaaaccttgggcagcgacaaactgaaggcactg
gccgggcacctggagctgcaccgcgcgcgttttgagtccgcctcggtctcggagatcggg
ctgatcttcaaggccctttcatcggcccagcttcattgccagatgcggccgctggcacga
ccggcgctggagcgggttgccgcgctcatgcacgacgatggattacgcgcaacgaacctc
gaggggctaggcagcctgtgcatgggcctgctgccgctgatccgcagtccggagctgacc
cctcgccatcgcagtcacgccctgagcgtattcaacacgttgcagccgatcgtagagcgc
aagatcgccttgtacctcacggtcggtggctcacctgcatcggctcagaccgaacagcac
gccacacgttgcccggcgttgacgttcttccaggtgctcaaggcctatgcggtggtgagt
cggcaatggaagccgcgccacgtccaaggcgcgcgccaggaactgcaccagcgccgcgag
cagctggcgcaatgggtcgaccagacgctcgagcgcacgcgcgaggccatcgaggcggac
ctcggcgagatgagctggaacctgatcgcgcagatcgaggcgggcgaccaggtgttcgac
gccctggaccggcgcatggccaaggaggcgccaaggatcgcgcaggcccatccaccgagc
cgcttcgacctgggcgctgggcgcctgggcatgcgttcggcacccggccagcccgtcgcg
ccggcacccggcaccggcagcacgacccacatcgtggtcgatctgcgtggcaagcaagtg
tcgaccaacgcgaccgagacggacaagccttactcgctgttcacgcggctgacgggcctg
ccgctggtggaggttcagctgccgggatcgatttcaacgttcatgctcgcgcgcacgctc
acctaccagggccagccctggcgcttcgacatgttcggcggcagccgcgccacgcgcggc
cacctgagccgcccctccgacctgctgtccggcgcatccgcatcgccgtcgctgctgccg
gcgatccgctatgccgacaccgtcccgggcagcagcctgatgaagctcatcaccaagctc
gccccgcagcgcgaggactggtcgcgcatgcagcgctcgctgctggagatggtgccaagc
gaccacgtcgtggagggcacgctgcgcctgggctttttcgacgacgtcagcggccctgcg
cacccattcaagcccacagcacccgacgggcgccccctggcgctgtgccccaacgatggc
tgcggctttctgaagctggaggtggcccagcgcatccctgccttccgtgcgtacttctcc
gcctgggaagcggtgcaggccggccgggctagccaagcccagcgcgaccttctggccaag
gacaagggacccacgcggctggcaccacaggcgctgcagcacttcccacgcgaccaggcg
gcgctgcaggaggcgcacgaagcgatgcagcgccggctgcaggcgctgccgcccgagctg
agccaactggtgctgtacgagctggccaccagcggcggctacgagggccagagagtccgg
gcggtgccctccgccgacaaccaggtgcacctgccgcgcgagcgcagccaggccttcgac
gccgccggcggcgccttgctgatcggcaagccgccttacgacaaggagaacctgctgccg
gtgccgcaggagtatgtcgctaccgcggcgcaaggcgatgccacggccgaattcctctcg
cagtgcttcggcatccagtacagctacaccggcttcgacgacagcgcgggcgacgctgct
ggcagcgacccggcgatgctgcacagcaagggcatgctcatcgtagtgccggcgcagaac
tggccggcgcagttcgcggacgtggacctggcctgctccaaggaagatctcaaaaccctg
tcgcgctggaccgccggacgcgaccgcagtgccgtgccgcaggacatgctcagcaccggc
agcctgcggctcaaggacatcgtggaacccgggcgtatgggcgcactgccgatcccggag
ctgcgcaagcgcaacatggacaccgacggtgacgatgcgttcgtgtacgcgggctacccc
aggctggcggagctgatcgcgcgcgagatggacgatcgtgcggcgcggcgcggccagcca
cgctctttcaagccgccgaagacggccacgccggccatcgacccagacagcggccactac
caggccgggcggctgtccgagatcatgtcgctgcagcgtggcggccagatcatgggcgcg
gccagcaccctggcggcgcgcttcatggcgcagcccgaccagctgcgcaaggcgatggcg
cgcaagatgatgttcggtacgtacgacggcatcgagcgcgacctgcgcaacggcttgcgc
caggtactcgacggcgagaccacagatcgcgaggtgttgttggcgcaactgcgcgcccag
gcgcacgaagcgatcagccgcgcccacatgcccgaggcgcgtgaagtggccgaactgctg
cacgcgcagctgcttgagctcgaactggcaacggctcgctcagccgaggcgccaggcttg
cccgacgcactggcttcagccgagacgccgcgcctgcccgacgcgctggctgaggcgttc
ccaacgctcgcccgggcctacatggctgcgcctgatgccgacgcacgtctgcgcgccatc
ctcgacaactacccggtgtgccggttatcgcacgcacagttcccggaggggcaaccgggg
ttcatccccaacgagccggaactgagcatgcgcaacctcttcaccatcgccatcaaggtg
ggcaccgatgcgctgaaatccgacaccggcacagcgctgttcgccaagatcgtggagtct
tgcgaacgctccgagcgagcgttcgccgagcgggtacgcagcgtgccctacggcaagacg
actgcccgggccatgcacgagggccgcttcgacgccgagcagaccaaggtgctgctgcag
aacatgccgacgatggcggcgggcgtcatgcaagacgcgctgcactcgctgcagcaggca
ggcctgatcgacccgccgcccccgccggccgagcgcctgcgcgccgtgcagcacgaggac
atcgtgcgtgcggccgaggccctgcggacacgcgccggcgagatggagcccgtgatcacc
aaaatgctgatcggcgccgccaagctccatggtgggcacctggagggaatgggccataaa
ttcaaatcgcccggctcgctggcggaaaaattcagacagcagattgctttgaaacacaag
accctggaagaagcggccgcttgcatcaacgacgcgctgcgctacagcgtggtattggag
ccgcagcacttcaccgccggcctgcgcggcgtgctggcctcactggacaatcaaggccat
gtgcgcgtcaagctgctcaacctgttcacgcggcagcggcaggcattcaaggcagtcaac
gtcacgctgcgcagcccggaaggcgcgctgtgggagatccagttccacacgccggacacc
ttcaagctcaaggagaaattccacgacgtgtacaaggaaagctttgcgctgcagcttaag
agcgcctcacaggtcgatcagcaccaactgcaggcgtctgcgcaggcggccttcagcggc
gtgaatgcgccgccgggctgcgaggagatcgacgattggaaatag
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