Xanthomonas fragariae: BER92_03100
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Entry
BER92_03100 CDS
T04667
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xfr
Xanthomonas fragariae
Pathway
xfr02010
ABC transporters
xfr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BER92_03100
03070 Bacterial secretion system
BER92_03100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfr02000
]
BER92_03100
02044 Secretion system [BR:
xfr02044
]
BER92_03100
Transporters [BR:
xfr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BER92_03100
Secretion system [BR:
xfr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BER92_03100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
SbcC_Walker_B
Zeta_toxin
DUF87
AAA_18
NB-ARC
GLTT
AAA_21
PRK
Motif
Other DBs
NCBI-ProteinID:
AOD13891
UniProt:
A0A1Y6H4D0
LinkDB
All DBs
Position
683122..685287
Genome browser
AA seq
721 aa
AA seq
DB search
MSGGSASLSLLEGGPSVQDRPDLGLQGLVLLAQFHGVAADATQLAHGFGRGGEPFDETTL
LLAAKQLGLKAKVVAQPAARIGMAALPALALVPDGDAFIVAKVGADQILIHDLVEKRPRS
ISPAEFEARYQGRLLQVASRASVLGDLAKFDFSWFIPAVVKYRKLMLEVFIVSFFIQLFA
LITPLFYQVVMDKVLVHNGLTTLDVIAIGLVSMAVFDVLLSGLRTYVFAHTTSKIDVELG
ARLFRHVLSLPLAYFESRRVGDTIARVRELENIRNFLTGQALTSVLDLFFTVVFLSVMFW
YSGWLTLIVVLSLLLYATISGLITPVLRKRLNDKFARGADNQSFLVETVSGIGTVKAMAV
DPRVTRTWDNQLAGYVSAGFNVTRIATLGQQGVQLVQKLTAVAVLFWGAKLVMEGKLSIG
QLIAFNMLSGQVTAPIIRLAQLWQDFQQVGISVERLGDILNTRTEVPGSRLALPPIRGQV
TFERVTFRYRPDAPEVLNGIELDIRPGEIIGIVGRSGSGKSTLTKLVQRLYTPERGRVLI
DGQDLALADPAWLRRQLGVVLQENFLFNRSVRENIALTDPGMPLERVIHAAKLAGAHDFI
LELPEGYDTKVGEHGTGLSGGQRQRIAIARALIGDPRILILDEATSALDYESEHAVMSNM
RAICKGRTVLIIAHRLSTVRQANRIVVVEKGRIIESGSHAELVDRPEGQYAHLYRLQQGT
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggaagtgcgtcgctctcgttgctcgagggcggcccgtcggtgcaagaccga
ccggatctggggctgcaggggttggttctgctagcgcaatttcatggtgttgctgccgat
gcgacacaactggcacacggattcggccgtggcggcgagccgttcgacgaaaccacgctg
ctgctggcagccaagcaactggggctaaaagccaaagtcgtggcccagccggccgcacgg
atcggcatggcggcgttaccggccctggccctggtgccggatggcgacgcgtttatcgtc
gccaaggtcggggcggaccagatcctgatccacgatctggtcgaaaagcggccgcgctcc
atctctcccgccgagttcgaagcacgttaccaggggcggttgctgcaggtggcctcgcgg
gcttcggtgcttggcgacctggccaagttcgacttcagctggttcattcctgcggtggtg
aagtaccgcaagttgatgctcgaggtctttatcgtctcgttcttcatccagctgttcgcg
ctgatcacaccgctgttctatcaagtggtgatggacaaggtgctggtgcacaacggcctg
accacgctggacgtgatcgcgatcgggctggtctcgatggcggtgtttgacgtgctgctg
tcgggtctacgcacctatgtgttcgcacacaccaccagcaagatcgatgtggagctcggc
gcgcgtttgttccggcatgtgctgtcgctgccgttggcgtattttgaatcgcggcgggtc
ggcgacaccatcgcgcgcgtccgcgagctggagaacatccgcaacttcctcaccgggcag
gcgctgacctcggtactggacctgttctttacggtggtctttctatcggtgatgttctgg
tacagcggctggctgaccctgatcgtggtgctgtccttgctgctgtacgccacgatctct
ggactgatcaccccggtgctgcgcaagcgcttgaacgacaagtttgcgcgtggcgccgac
aaccagtccttcctggtcgagacggtcagcggcatcggcacggtcaaggcgatggcggtg
gatccgcgtgtgacccgcacctgggacaaccagctggccggctacgtcagcgccggtttc
aacgtcacccgcatcgccacgctgggccagcaaggcgtgcaactggtgcagaaactcacc
gccgtggcggtgctgttctggggcgccaagttggtgatggaaggcaagctgtcgatcggc
cagctgatcgccttcaacatgctgtccggtcaggtcaccgcgcccatcatccggctggct
cagttgtggcaggacttccagcaggtcggtatctcggtcgagcggttgggcgacatcctc
aatacccgtaccgaggtgccgggcagccgcctcgcattgccgccgattcgcgggcaggtg
acgttcgagcgggtcacgttccgctaccggccggacgcgcccgaggtgctcaacgggatc
gagctggatatccgcccgggagagatcatcggcatcgtcggccgttcgggctccggcaag
agcacgctgaccaagctggtgcagcggctctacacgcccgagcgcgggcgtgtgctgatc
gatggccaggacttggcgctggccgatccggcctggctacgccggcagctgggcgtggtg
ttgcaggaaaacttcctgttcaatcgcagcgtacgcgagaacatcgcgttgaccgatccc
ggcatgccgctggagcgggtgatccatgcggccaagctggcaggtgcgcacgacttcatt
ctggaactgccagaaggctacgacaccaaggttggcgagcacgggactggtctgtctggc
gggcagcggcagcgcatcgcgatcgcgcgcgcgctgatcggcgatccacgcatcctgatt
ctggacgaagcgaccagcgccctggattacgaatcggaacatgcagtgatgagcaacatg
cgcgccatctgcaaggggcgcaccgtgctgatcatcgcgcaccgcctttccacagtgcgg
caggcaaatcgcatcgtcgtggtggagaagggacgcatcatcgagagcggctcgcatgcc
gagctggtcgaccggccggaaggccagtacgcgcatctatacagactgcaacaggggaca
ccatga
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integrated database retrieval system
