Xanthomonas fragariae: BER92_03360
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Entry
BER92_03360 CDS
T04667
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00730
Thiamine metabolism
xfr01100
Metabolic pathways
xfr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BER92_03360
Enzymes [BR:
xfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BER92_03360
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AOD13937
UniProt:
A0A1Y6HBJ1
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All DBs
Position
758283..760160
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AA seq
625 aa
AA seq
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MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVQGSRADLQVPMREIALTRTPTLFGGEDNP
PLSVYDTSGPYTDPHAAIDLVAGLDPLRAGWIAERGDTVALDGLSSNFGRGREHDVRLDA
VRFPARRLPRVARDGANVTQMHYARRGIITPEMEFVAIRENQRLEAVTDAMLRKQHPGEA
FGAAIQQRITPEFVRDEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSILAKWCLAHHKE
NFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKIAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAKEFHDQTLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMDEE
HALSAGMDEKSAQFLAQGAQVYRAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgcccaccgttttgcagcaacaagcccagtcgttgtccgaggctgtgacc
cagccgattcccggttcccgcaagatcttcgtgcaaggctcgcgcgccgatctacaggtg
cccatgcgcgaaatcgcactgacccgcacccccacattgttcggtggcgaagacaacccg
ccgctcagtgtctacgacacctccgggccgtacaccgacccgcatgctgcaatcgacctt
gtcgctggcctggatccgctgcgcgctggctggatcgccgagcgtggcgatactgtggcg
ctggacgggctgagttcgaacttcgggcgcggccgcgagcacgatgtacggctggatgcg
gtgcgcttccccgcacggcgcttgccgcgggtggcgcgcgacggtgccaacgtcacccag
atgcactacgcacgccgcggcatcatcacccccgagatggagttcgtcgcaattcgcgaa
aaccagcgcctggaggcggtgaccgacgcgatgctgcgcaagcaacatccgggcgaagcc
ttcggtgcggcgatccaacaacgcatcacgccggagttcgtgcgcgacgagattgcgcgc
ggtcgcgcgatcctgcccaacaacatcaatcatccggaaagcgagccgatgatcatcggc
cgcaattttctgaccaagatcaacgccaacatcggcaatagtgcggtgtcctcgggcatt
gccgaagaagtcgaaaagctggtgtggtcgatccgctggggcggcgacacggtgatggat
ctgtccaccggcaagcacatccatgaaacgcgcgagtggatcatccgcaactcgcctgtg
ccgatcggcacggtgccgatctatcaggcgctggaaaaggtcgatggccgcgccgaggag
cttacctgggaaatctttcgcgacaccttgatcgagcaggccgaacaaggcgtggactac
ttcaccatccacgccggcgtgttgttgcgctacgtgccgcttaccgccaaacgcgtcacc
ggcatcgtctcgcgtggtggctcgatcctggccaagtggtgcttggcgcatcacaaggaa
aactttctctacacccattttgaagacatctgccagatcatgaaggcctacgacgtggcg
ttctcgctgggcgatggtttgcgcccaggctgcatcgccgatgccaacgacgcggcgcag
ttcggcgagctggaaacgctgggcgagctgaccaagatcgcgtggaagcacgatgtgcaa
accatgatcgaaggtcctggccatgtgccgatgcagttgatcaaggaaaacatggacaag
cagctgcgcgaatgcggcgaagcaccgttctataccttggggccgttgaccaccgatatc
gcccccggctacgaccacatcaccagcgcgatcggcgcggcgatgatcggttggttcggt
accgcgatgctctgctatgtcacgccgaaggagcacttgggcctgcctaaccggcaggac
gtacgtgacggcatcatggcctataagatcgccgcgcatgccgccgacctcgccaagggg
catccgggcgcgcaggtgcgcgacaacgccttgagcaaggcgcgtttcgaattccgttgg
gacgaccaattccatctcggcctggatccggaaaaggccaaggagttccacgaccagact
ctgcccaaggacgcgcacaaactggcgcacttctgttcgatgtgcgggccgcacttctgt
tcgatgaaaattacccaggacgtacgcgattacgcagccgagcacggcatggacgaagag
cacgcgctatcggcgggaatggacgaaaagtcggcgcaatttctggcgcaaggcgcgcag
gtgtatcgcgcttcgtga
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