Xanthomonas fragariae: BER92_03380
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Entry
BER92_03380 CDS
T04667
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfr02000
]
BER92_03380
Transporters [BR:
xfr02000
]
Other transporters
Pores ion channels [TC:
1
]
BER92_03380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AOD13941
UniProt:
A0A1Y6HEQ6
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All DBs
Position
764007..766895
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AA seq
962 aa
AA seq
DB search
MNLRTSAVRLGLLPAGIAIALTPAFAANAQEQSAPSTTTLDRIEITGSRIRSVDVETAQP
VFTVTQQDIQKSGLVSVGDILQNLSIAGTQTYSKASVLTSDPEQGGQYVNLYNLGENRTL
VLVNGKRWTSSLSGLSDMSTIPSALIERIEVLKDGASAIYGSDAVAGVVNIILRHNYDGA
EASAYFGQNGRGDGSKEQYSFTAGTTNERSSLVFGVNYTQEDPVWARARALTRYSSGPNH
IEESLSATGPWGRFTSDDQTYILNHTGSFDGSGVGADSRNLANYHNEITTDDYYNSVNQM
MLQQSSKNKSVFTSGSYNITDSITFKSTAMYSERESNRQIAGYPLQAASQPQFPVAISGS
SYYNPVGQDINSWFRRIVELPRTTESNVKSTHLDAALEGVLDVGSHGWNWDVGFNYNKYD
VTQVSRGNINLLALQKAIGPSFLNAQGQVQCGTAASPLPLGTSNALGQCTPFNVLGGPSA
STPDALQYINALGQATQQSLSKQWNANITGGLFDLPAGELGFAAGVEHREISGYDYPDML
SSAGYTTDLAAQATEGSYQTNEAYLEFLIPVLKDLPGAKQLSFDVAARYSNYSRFGDTTN
SKFSFTWKPIDDLLVRGTYGTGFRAPTLADTFGGGSQTFDTFTDPCDATFGSLGNSGVAA
RCAGAGLPADFRQTDSAGNPVARRDVQGNAPFNSGVGNAELEPERSITRTVGMVYSPHWV
QGLDFSLDWYRISISNIITLLSADDVLNNCYLNNLESYCADFGRDAVTGQVTTLSRGNVN
LGRLETEGYNFGVRYRLPEMGIGKFVVNLDTNYLTTYKSQAESGAEWQNYAGYWNYPRVR
ATLGVGWSRDALSASWDLRYYGGFRDYCWDAAAGIECNDPSYQTSNPAWGGGNGANKKGS
ISYQDASVSWQAPWNGSVTIGARNVWNKKPPITYSITNSSTAAIDPMLDYDRFLFMQYNQ
RF
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcgcacttccgcagtgcggctgggcttgttgcccgccggtattgcgatcgcg
ttgacgccggcattcgctgccaatgcacaagagcagtccgcaccgtcgaccacgacgttg
gaccgcattgaaattaccggctcgcgcatccgctcggttgacgtggaaaccgcacagccg
gtgtttaccgtcacccagcaggacattcagaagtcgggccttgtcagcgttggcgacatc
ctccagaacttgtcgattgctggtacgcagacctacagcaaggcatcagtgctgacctcc
gatccggaacagggcggccagtacgtcaacctgtataacctgggtgagaaccgtaccctg
gtgctggtgaacggcaagcgttggaccagcagcctgtctggcctgagcgacatgtccacg
attccgagcgcgctgatcgagcgcatcgaagtcttgaaggacggcgcttcggcgatctat
ggttccgacgcagtggccggtgtagtcaacatcatcctgcgccacaattacgacggcgca
gaagcgtcggcgtacttcggccagaacggccgtggtgatggttccaaggagcagtattcc
ttcaccgcaggtaccaccaacgagcgttcgtcactggtgtttggcgtcaactacacccag
gaggatccagtgtgggccagggctcgcgcgctgactcgttactcgtctggcccgaaccac
atcgaagaaagcctgagcgcgaccggcccgtggggccgtttcacctccgacgaccaaacc
tacatcctcaaccacaccggctcgttcgatggtagcggcgtcggcgcagactcgcgcaac
cttgccaactaccacaacgagatcaccaccgacgattactacaacagcgtcaaccagatg
atgttgcagcagtccagcaagaacaagtcggtcttcacaagcggcagctacaacatcacc
gacagcatcaccttcaagtcgacggcgatgtattccgagcgcgagtcaaaccgtcagatt
gccggctatcctctgcaggccgcatcgcagccgcagttcccggtggcgatcagcggcagc
agctactacaacccggtcggccaagacatcaacagctggttccgccgtatcgtcgagttg
ccgcgcaccaccgagagcaacgtcaagtccacccacctcgatgcagcgctggaaggcgtg
ctcgatgtcggcagtcacggctggaactgggacgtcggtttcaactacaacaaatacgac
gtgactcaggtctcgcgcggcaacatcaacctgttggcgttgcagaaggcgatcggtccg
tcgttcctcaatgcacagggccaggtgcagtgcggtactgcggccagcccgctaccgctg
ggcaccagcaatgcgctgggccagtgcaccccgttcaacgtcctgggcggcccgtcggcc
tccaccccggacgccctgcagtacatcaatgcgctgggtcaggcaacgcagcagagcctg
agcaagcagtggaatgccaacatcaccggtggcctattcgatttgccggcaggtgagctg
ggcttcgctgccggtgtcgaacaccgtgaaatcagcggctacgattatccggacatgctg
tccagcgccggttacaccaccgatctggccgcacaggcaaccgaaggtagctaccagact
aacgaagcctatctggagttcttgattccggtactgaaggatctgccgggcgccaagcaa
ctgtcgttcgacgtcgctgcgcgttacagcaactacagccgcttcggcgataccaccaac
agcaagttcagcttcacctggaagccgatcgacgacctgctggtgcgtggtacctacggc
accggcttccgggcgccgacgctggccgacaccttcggtggtggctcgcagacgttcgac
accttcaccgatccgtgcgatgcgaccttcggttcgttgggcaacagcggggtggcagca
cgctgcgctggcgcaggcctgccagctgacttccgtcagaccgatagtgctggcaacccg
gtggcccgtcgcgatgtacagggcaatgcgcctttcaattctggcgtcggcaatgccgag
ctggagccggaacgcagcattacccgcaccgtcggcatggtctatagcccgcactgggtg
cagggtctggacttctcgctagattggtaccggatctcgatctccaacatcattacgttg
ttgtcggccgatgatgtgttgaacaattgctacctcaataatctggaaagctactgcgcc
gacttcggtcgcgatgcggtgaccggtcaggtcacaacgctgagccgtggcaacgtcaac
ctgggtcgtctggaaaccgaaggctataacttcggcgtgcgttaccgtttgcctgaaatg
ggtatcggcaagttcgtcgtcaacctcgacaccaactacctgaccacttacaaatctcag
gccgagtctggtgccgagtggcagaactatgccggttattggaactacccgcgcgtgcga
gctacgttgggtgtgggttggtcgcgtgatgcgttgtcggccagctgggatctgcgttac
tacggtggcttccgtgactactgctgggatgccgcggctggtatcgagtgcaacgacccc
agctaccagacgtccaacccggcatggggcggcggtaacggagccaacaagaagggctcg
atctcctatcaggacgcctctgtcagctggcaggctccatggaacggcagcgtgaccatc
ggcgcacgcaacgtgtggaacaagaagccgccgatcacctactcgatcaccaacagcagc
accgctgcgatcgatccgatgctcgattacgaccgattcctgttcatgcagtacaaccag
cgcttctga
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