Xanthomonas fragariae: BER92_03585
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Entry
BER92_03585 CDS
T04667
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BER92_03585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfr03021
]
BER92_03585
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_03585
Enzymes [BR:
xfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BER92_03585
Transcription machinery [BR:
xfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BER92_03585
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BER92_03585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AOD13974
UniProt:
A0A1Y6HAE5
LinkDB
All DBs
Position
802143..802442
Genome browser
AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVNNRFELVMMASKRARQLANGVQPLIENADASDKPTVMALREIAARRI
DNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcattaccgtagaagattgcctggaagtcgtgaacaaccgtttcgagctggtc
atgatggcctccaagcgtgcccgtcagctcgccaacggcgtgcagccgctgatcgagaac
gcagacgccagcgacaagcccaccgtgatggcactgcgcgaaatcgccgcacgccggatc
gacaacgcgctgatcgatgaagtcgagaaggccgagcgcgagcgtgctgagcgcgaagcg
ctggagtgggctgctgccgaagtggttgccgacgaagacatgtccaagaacgacgattga
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