Xanthomonas fragariae: BER92_03630
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Entry
BER92_03630 CDS
T04667
Name
(GenBank) peptidase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00550
Peptidoglycan biosynthesis
xfr01100
Metabolic pathways
xfr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BER92_03630
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BER92_03630
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xfr01003
]
BER92_03630
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfr01011
]
BER92_03630
Enzymes [BR:
xfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
BER92_03630
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BER92_03630
Glycosyltransferases [BR:
xfr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
BER92_03630
Peptidoglycan biosynthesis and degradation proteins [BR:
xfr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
BER92_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AOD13982
UniProt:
A0A1Y6GZ65
LinkDB
All DBs
Position
complement(812213..814639)
Genome browser
AA seq
808 aa
AA seq
DB search
MPRIRRWLGWILAMIVVLALLGAVAAGGLYYAISSKLPDVQSLKQVELQEPMYVYSSDGR
LMAVYGETRRYPIQMKNVPLRLKQAFLATEDARFYEHGGVDYKGIARAVWLLASTDAKRV
PGGSTITQQVARQFFLSSEYSYTRKLAEILLARKIESELSKDEIFELYLNKSFFGNRAYG
VGAAAEYYYGKKMSELSLDEMASLAGIPKFPSSGNPISNPERAQERRDYYVLQRMADLGF
VSQAEADAAKAVPMHAKQHEPPVEVYAPYVAELVRQEMIAKYGGDVLNKGYHVTTTIDAT
LQSGADAAVAEGLRLYDHRHGWHGVEQHFDVAADADALALAKHLSGVFTQGGLRAVIVAR
TNADGGVTVVQSDKTELTLPATASHWTNKTPAKLLTRGDLTRIRAGEKDGEWIIDQLPLG
QAALVSLDANSGALRALIGGFSFAGNKFNRATQARRQPGSSFKPFVYAAAFEKGFNPASI
VLDAPVVFRDRRGKTWSPQNDGGGFRGPMRLREALVQSRNLVSVRLLDAISVDFARKYIS
QFGFQEAELPPNLSMSLGTASLTPLSVARGYAVFANGGSRVETWIVDEVKDRDGNVIFKE
VPAVACRTCALQGGTAAPVSQVVDGFNFGAQAPAALPAPAADAAPAPAQTAPAAIAETRI
APRAIDARTAYQLVSMMRDVVQRGTGTAAKVLGREDVGGKTGSTNDHRDAWFSGFGGPYA
TTVWVGRDDFRSLGYREYGGKAALPIWIDYMRVALKDMPIAANDPPEGMIQATINGAVEW
VKTEDLDRLQDYDYGLQQQQDEKAFDIF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtattcgccgttggctgggctggatcctggccatgatcgtggtgctcgcactg
cttggcgctgttgctgccggcggcctgtattacgccatttcctcgaagttgccggacgtg
cagtcgctcaagcaggtcgagctgcaagagccgatgtacgtctattccagcgacggtcgc
ctaatggccgtctatggcgagacccggcgctatcccatccagatgaagaacgtgccactg
cgcctcaagcaggccttcctggcgaccgaggacgcgcgcttctacgagcacgggggcgtg
gactacaagggcattgcccgcgcggtctggctgctggccagcaccgacgccaagcgcgtg
ccgggtggttcgaccatcacacagcaggtggcgcgccagttcttcctgagttccgagtac
agctacacgcgcaagctcgccgagatcctgttggcgcgcaagatcgagagtgaactgagc
aaggacgagatcttcgagctgtatctcaacaagagcttcttcggtaaccgtgcctacggc
gtaggcgctgccgccgagtactactacggcaagaaaatgagtgagttgagcctggacgag
atggcctcgcttgctggcattcccaagttcccgtccagcggcaatccgatcagcaaccca
gagcgtgcgcaggaacgtcgcgactattacgtgctgcaacgcatggccgatctgggcttc
gtcagtcaggcagaagccgatgctgcgaaggcggtgccgatgcatgcaaagcagcacgag
ccgccggtcgaggtgtatgcaccgtacgtggccgagctggtgcgtcaggagatgatcgcc
aagtacggcggcgatgtgcttaacaagggctaccatgtcaccaccaccatcgacgccacg
ctacagagcggtgccgacgcggcggttgccgaaggcctgcgcctgtacgaccaccggcat
ggctggcacggcgtggagcagcacttcgacgtggccgccgatgccgacgcgctggcattg
gccaagcatttgtcgggcgtgttcacccagggcggcttgcgcgcggtgatcgtggcgcgc
accaatgccgatggcggcgtcaccgtggtgcagagcgacaaaaccgaactgaccttgccg
gcaactgccagccactggaccaacaaaacgccggccaagctactgacccgcggtgacctg
acccgcatccgtgccggcgaaaaggacggcgagtggatcatcgaccagttgccgctcggc
caggccgcgctggtgtcgctggacgccaatagcggggccctgcgggctttgatcggcggt
ttcagttttgccggcaacaagttcaatcgcgccacccaggcacggcgtcagccagggtcg
agcttcaaaccgttcgtgtatgcggccgcattcgagaagggcttcaatcccgcttcgatc
gtgctggatgcgccagtggtatttcgcgatcgtcgcggcaagacctggtcgccgcagaac
gacggcggcggtttccgtggcccgatgcgcttgcgcgaagccctggtgcaatcgcgcaac
ttggtgtcggtgcgcttgttggacgcgatcagcgtcgatttcgcacgcaaatacatcagc
cagttcggtttccaggaagcggaattgccgcccaatctgtcgatgtcgctgggcaccgcg
tcgctgacgccactatcggttgcgcggggctatgcagtgtttgccaacggcggctcgcga
gtggagacctggatcgtcgatgaggtcaaagaccgcgacggcaatgtcatcttcaaggaa
gtgccggcggtggcctgccgcacctgcgcgttgcaaggcggcaccgccgcaccggtgagt
caggtcgtggacggcttcaacttcggcgctcaggcacctgccgcactgccagcacccgca
gccgatgcagcaccggcgcctgcacaaaccgcgccggccgccattgccgaaaccaggatc
gcaccgcgcgccatcgatgcgcgcactgcgtatcagctggtgtcgatgatgcgcgatgtc
gtccagcgtggcacgggcaccgcagccaaggtgctggggcgtgaggacgtcggcggcaag
accggttcgaccaacgatcaccgcgacgcctggttctccggcttcggtggaccctacgcc
accacggtgtgggtgggtcgcgatgatttccgctcgctcggttatcgcgagtacggtggc
aaggcggcgttgccgatctggatcgactacatgcgcgtggcgttgaaagacatgccgatc
gcagccaacgacccgcctgaaggcatgatccaggccaccatcaatggcgcagtcgaatgg
gtgaagaccgaagatctggatcgcctgcaggactacgattacggtctgcagcaacagcag
gacgagaaggccttcgatatcttttga
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