Xanthomonas fragariae: BER92_04480
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Entry
BER92_04480 CDS
T04667
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00260
Glycine, serine and threonine metabolism
xfr00460
Cyanoamino acid metabolism
xfr00630
Glyoxylate and dicarboxylate metabolism
xfr00670
One carbon pool by folate
xfr00680
Methane metabolism
xfr01100
Metabolic pathways
xfr01110
Biosynthesis of secondary metabolites
xfr01120
Microbial metabolism in diverse environments
xfr01200
Carbon metabolism
xfr01230
Biosynthesis of amino acids
xfr01240
Biosynthesis of cofactors
xfr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BER92_04480 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BER92_04480 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BER92_04480 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BER92_04480 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BER92_04480 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BER92_04480 (glyA)
Enzymes [BR:
xfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BER92_04480 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
AOD14117
UniProt:
A0A1Y6H9W3
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Position
1015375..1016628
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AA seq
417 aa
AA seq
DB search
MFSRDVRLETYDPELAKAIAAEVGRQEDHVELIASENYCSALVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAERLAIDRIKQVFGADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNAQGLIDYEEVQRLATEHKPKMVIAGFSAYSQK
IDWARFRAIADSVGAYLFVDMAHVAGLVATSVYPSPIEHAHVVTSTTHKTLRGPRGGIIL
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTS
GLRLGTPAITTRGYLEQDSIDLANWIADVLDAPTDEAVLSKVRDAVTAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgtgacgtccgactggaaacctacgaccccgaactggccaaggccatcgcc
gctgaagtcggccgccaggaggatcacgtcgaactgatcgccagcgagaactattgcagt
gcactggtgatggaggcgcagggcagtcagctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggcggctgcgaattcgttgacattgccgaacgattggcgatcgac
cgcatcaagcaggtgtttggagccgactacgcaaacgtgcagccgcatagcggttcgcag
gccaaccaagcggtgtatctggcgttgctgcagccgggcgacaccattctgggcatgagc
ttggcgcacggcggtcacctgacccacggggccaaggtcaatgcctccggcaagctgttc
aacgcggtgcagtacggtgtcaacgcgcagggcctgatcgattacgaagaagtgcaacgc
ctggccaccgagcacaagccgaagatggtcatcgccggtttctctgcctattcgcagaag
atcgattgggcacgcttccgcgccattgccgatagcgtcggtgcgtatctgttcgtcgat
atggcgcacgttgcgggcctggtggctaccagtgtgtacccgagtccgatcgagcatgcg
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaagggcgccagcgaagagctgcagaagaagctgcagtcgatcgtgttcccgggtatc
cagggcggcccgctgatgcacgtcatcgctgccaaggcggtcgccttcaaggaagcgctg
gagccggagttcaagacctaccagcagcaggtggtcaagaacgcccaggcgatggccaac
acgctgatcgcgcgcggctacaagatcgtctccggcggcaccgaaaaccacctgatgctg
gtcgacatgatcggccgcgacgtctccggcaaggacgccgaagccgccctcggcaaggcg
cacatcaccgtcaacaagaatgcggtgccgaacgacccgcgctcgccgttcgtcacttcc
ggcctgcgtctaggcactcctgccatcactacgcgtgggtatctggagcaggatagcatc
gacctcgccaactggatcgccgacgtcctcgacgccccgaccgacgaagcggtgctgtcg
aaggtgcgcgatgcggtgactgcgcagtgcaggaaatatccggtgtatggctga
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