KEGG   Xanthomonas fragariae: BER92_04480
Entry
BER92_04480       CDS       T04667                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
xfr  Xanthomonas fragariae
Pathway
xfr00260  Glycine, serine and threonine metabolism
xfr00460  Cyanoamino acid metabolism
xfr00630  Glyoxylate and dicarboxylate metabolism
xfr00670  One carbon pool by folate
xfr00680  Methane metabolism
xfr01100  Metabolic pathways
xfr01110  Biosynthesis of secondary metabolites
xfr01120  Microbial metabolism in diverse environments
xfr01200  Carbon metabolism
xfr01230  Biosynthesis of amino acids
xfr01240  Biosynthesis of cofactors
xfr04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BER92_04480 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    BER92_04480 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BER92_04480 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    BER92_04480 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    BER92_04480 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    BER92_04480 (glyA)
Enzymes [BR:xfr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     BER92_04480 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 Phage_capsid
Other DBs
NCBI-ProteinID: AOD14117
UniProt: A0A1Y6H9W3
LinkDB
Position
1015375..1016628
AA seq 417 aa
MFSRDVRLETYDPELAKAIAAEVGRQEDHVELIASENYCSALVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAERLAIDRIKQVFGADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNAQGLIDYEEVQRLATEHKPKMVIAGFSAYSQK
IDWARFRAIADSVGAYLFVDMAHVAGLVATSVYPSPIEHAHVVTSTTHKTLRGPRGGIIL
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTS
GLRLGTPAITTRGYLEQDSIDLANWIADVLDAPTDEAVLSKVRDAVTAQCRKYPVYG
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttctcgcgtgacgtccgactggaaacctacgaccccgaactggccaaggccatcgcc
gctgaagtcggccgccaggaggatcacgtcgaactgatcgccagcgagaactattgcagt
gcactggtgatggaggcgcagggcagtcagctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggcggctgcgaattcgttgacattgccgaacgattggcgatcgac
cgcatcaagcaggtgtttggagccgactacgcaaacgtgcagccgcatagcggttcgcag
gccaaccaagcggtgtatctggcgttgctgcagccgggcgacaccattctgggcatgagc
ttggcgcacggcggtcacctgacccacggggccaaggtcaatgcctccggcaagctgttc
aacgcggtgcagtacggtgtcaacgcgcagggcctgatcgattacgaagaagtgcaacgc
ctggccaccgagcacaagccgaagatggtcatcgccggtttctctgcctattcgcagaag
atcgattgggcacgcttccgcgccattgccgatagcgtcggtgcgtatctgttcgtcgat
atggcgcacgttgcgggcctggtggctaccagtgtgtacccgagtccgatcgagcatgcg
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaagggcgccagcgaagagctgcagaagaagctgcagtcgatcgtgttcccgggtatc
cagggcggcccgctgatgcacgtcatcgctgccaaggcggtcgccttcaaggaagcgctg
gagccggagttcaagacctaccagcagcaggtggtcaagaacgcccaggcgatggccaac
acgctgatcgcgcgcggctacaagatcgtctccggcggcaccgaaaaccacctgatgctg
gtcgacatgatcggccgcgacgtctccggcaaggacgccgaagccgccctcggcaaggcg
cacatcaccgtcaacaagaatgcggtgccgaacgacccgcgctcgccgttcgtcacttcc
ggcctgcgtctaggcactcctgccatcactacgcgtgggtatctggagcaggatagcatc
gacctcgccaactggatcgccgacgtcctcgacgccccgaccgacgaagcggtgctgtcg
aaggtgcgcgatgcggtgactgcgcagtgcaggaaatatccggtgtatggctga

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