KEGG   Xanthomonas fragariae: BER92_05540
Entry
BER92_05540       CDS       T04667                                 
Name
(GenBank) ABC transporter
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
xfr  Xanthomonas fragariae
Pathway
xfr02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    BER92_05540
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xfr01002]
    BER92_05540
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:xfr02000]
    BER92_05540
   02044 Secretion system [BR:xfr02044]
    BER92_05540
Peptidases and inhibitors [BR:xfr01002]
 Cysteine peptidases
  Family C39
   BER92_05540
Transporters [BR:xfr02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    BER92_05540
Secretion system [BR:xfr02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   BER92_05540
SSDB
Motif
Pfam: Peptidase_C39 ABC_membrane ABC_tran Peptidase_C70 Guanylate_cyc_2 RsgA_GTPase AAA_16 Peptidase_C39_2 AAA_21 AAA_22 nSTAND3 MMR_HSR1 AAA_18 TsaE SMC_N FeoB_N DLIC AAA_33 NB-ARC NACHT AAA AAA_25 AAA_29 MobB Rad17
Other DBs
NCBI-ProteinID: AOD14294
UniProt: A0A1Y6H988
LinkDB
Position
1212648..1214858
AA seq 736 aa
MKDVLTPSANGDAEPDRSAEPSLVFSSKRRVPHIRQTESSECGLACIAMLLSYYGHETSL
GELRNRFTVSTSGATLASLIEIADANGLTTRPLRLELYELPKLLLPCMVHLHHGHFVVLT
AVRGGHVHISDPATGVKKIKLDEFDELFSGIALEAHPGPAFKKIKSVPSVSLRDLAGSLR
SLVPAFWVVGILALFLEGCALIAPQYLRLTMDQVLSVKYDGLVTTLAIGFSIVLLVQLVL
TVARKWTSLWISSTTGLRWSSNLFRHLVSLPQSYFVKRHTGDISSRFQSIYSIQQSLTTK
MLEAVIDGVMSFLMLLLLMSYDAPLAFALLAFTIAYVGSRYAYYAKLKEANLDQINIDAR
RQSLLYETVRSIQPIKLFNKSALWASRFTNYSAKATNATIGAERIRIGFDSVQLLIQGLC
RIFVIWEGTRLVLSGDMTVGVLTVFLIYATQFSQRSINLADYLMQLRLLRLHTERISDIT
HSEPESFLHGNGALEDAAPAIAIVNGYFRYSSTDKWIMSALQLRAPAGQVIAIVGNSGVG
KTTLVRVLAGLEDLQVGDFLVNEEDLRKVGKSSYRSKVSIVMQGDNLLSGTLSENISMFD
EHIDQERLVQAAKLACIHDDIQRMPMGFNTRVGDLGNTLSGGQKQRIFLARAFYRRTKLL
LMDEPTTGVDEQMGIQLMKNVRSIGATTVIVTHDKNISRMCDMQYLFVSGNLRPLIKEQP
RSFEGSVDVDVTKKSN
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgaaggacgtcttgacaccatccgccaatggcgatgccgagccggatcgctctgctgaa
ccaagcctggtgttctcatcaaagcgccgtgtgcctcatatccgccagacggagtccagt
gagtgtggtctggcctgcattgcgatgctgctttcctactacggccatgaaacgagcctc
ggggagcttcgcaaccgctttacggtgtcgaccagtggtgcaacgctcgcttcgctgatt
gaaatcgctgatgccaacgggctcacaacgcgtccgcttcgcttggagctttacgaactg
cccaagctgttgctgccttgcatggtccacctgcaccacgggcactttgtcgtgttgacg
gctgtgcggggcggccacgtgcacatcagcgatcccgcaacaggcgtcaagaagatcaag
ctcgacgagttcgatgaactctttagcggcattgcgttggaagcgcatccaggcccggcc
ttcaagaagatcaagagcgtgccatcggtatcgcttcgcgatcttgcaggctcgcttcgg
tccctggtgcccgcgttctgggttgtgggcatcttggcgctcttcttggaaggctgtgcg
ctgattgcgccgcaatatctgcgactgaccatggatcaggtgctcagcgtcaagtacgat
ggcctggtcaccacattggcgatcggcttttcgatcgtgctcctggtccagctcgtcttg
accgttgccaggaagtggacctcgctgtggatctcttcgaccactggcttacggtggagc
agcaacttgttccgtcacttggtgtcgctaccccagtcgtatttcgtaaagcggcacacc
ggggatatttcaagccgcttccagtcgatctactccatccagcagtcactcacgacgaag
atgctggaagcggtcatcgatggggtgatgtctttcctcatgctgttgctcttgatgagc
tacgacgcgccgcttgccttcgctttgttggctttcaccattgcctatgtgggttcgcgc
tacgcctactacgccaagctcaaagaagccaacctcgaccagatcaacattgatgcacgc
cggcaaagcttgctctacgaaacggtccgaagcatccagcccatcaagctgttcaacaag
tcagcgctctgggcgtcgcgcttcacgaactacagcgcgaaagcgaccaacgcgacaatc
ggggccgagcggatccgcatcgggttcgattctgtccagctcctcatccagggcctgtgc
cgcatctttgtaatttgggaaggcacccggttggtgctcagtggggatatgacggtcggg
gtgctgacggtctttttgatctacgcgacgcagttcagccaacgcagcatcaacttggcc
gactacttgatgcagctccggctgcttcgtttgcacacagaacgcatttcagacatcacc
cacagcgagcctgagtcgtttttgcatggtaacggcgcactggaggatgccgcgcccgcc
attgccattgtcaacggctacttccgctactcgtccacggacaagtggatcatgagtgct
ttgcagctcagagccccggcaggccaagtgattgcgatcgtcgggaactcaggcgtgggc
aagaccacactcgtccgcgttctggcggggcttgaagatcttcaagtcggggacttctta
gtcaatgaagaggatctgcgcaaagtggggaagtcgagctaccgaagcaaggtcagcatc
gtcatgcaaggagacaatctgttgtcaggaacgttgtcggaaaacatctctatgttcgat
gagcacattgaccaagagcgcctggtgcaggctgcaaaattggcgtgtatccacgacgat
atccagcgcatgccaatgggcttcaacaccagagttggcgacttgggaaacacgctgtca
ggtggtcagaaacaacggatcttcttggccagagccttttacaggcgcaccaagttgttg
ttgatggatgagccaacgactggggttgatgagcagatgggcatacagctgatgaagaac
gtcaggagtattggcgcgaccacagtcatcgtaacgcacgacaagaacatctctcggatg
tgcgatatgcagtatctcttcgtgagcggaaatctgagacctttgatcaaggagcagcct
agatcctttgaaggcagcgttgatgtggatgtcaccaaaaaatctaactag

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