Xanthomonas fragariae: BER92_06715
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Entry
BER92_06715 CDS
T04667
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_06715
Enzymes [BR:
xfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BER92_06715
DNA repair and recombination proteins [BR:
xfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BER92_06715
Prokaryotic type
BER92_06715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOD14479
UniProt:
A0A1Y6HGV6
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All DBs
Position
1475482..1476900
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AA seq
472 aa
AA seq
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MSHAIVWFRRDLRLEDNPALRAALDAGHHPIPLYIDAPQEEGEWTPGAASRTWRHRSLAA
LDAALRTRGSGLVIVAGNSAQVLDKVIAQTGAVAVYWNRKYEPATQPRDAQIKRTLRERG
IEVQSCNSALLFEPWQLSTQQGSPYKVFTPFWRNALTQLQLPVALPAPRSLPPVPAQLTT
DALNTLGLIPRLHWDQGFWELWQPGEAGAHELLEIFIDGALSGYRENRDRPDRVGTSQLS
PHLHFGEIAPWRIASTLEANRNTRTSAEIDGYIRQLGWRDFAYHLLHHFPDTTNQNLNPR
FEGFDWATVDPVALQAWQRGRTGIPIIDAGMRQLWHTGWMHNRVRMIVGSLLCKHLRIHW
IEGARWFWDTLVDADLANNTLGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQAAYITRWV
PELGKLAVKERFAPWLHPLSLARCAPEYPRTPIIGLSEGRDAALAAYAKTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgccatcgtctggtttcgtcgcgatctgcgtctggaagacaacccggcccta
cgtgccgcactggatgccgggcaccacccgattccgttgtacatcgatgcgccacaagaa
gaaggcgagtggacgccgggtgccgcctcacggacctggcggcatcgctcgctggcggcg
ctggatgcggcactgcgtacgcgtggcagcggcttggtcattgtcgccggcaacagcgcg
caggtgctggataaggtgatcgctcagaccggtgcggtggctgtgtattggaatcgtaaa
tacgaaccggccacccagccgcgcgatgcgcagatcaaacgcacgttgcgcgagcgcggc
atcgaagtgcagagctgcaattcggccttgttgttcgaaccgtggcagttgtcgacccag
cagggcagcccgtacaaggtgttcaccccgttctggcgcaatgcactgacgcagctgcaa
ttgcccgtcgcactgcctgcgccgcgcagtctgccgccggtgcctgcgcagctgacaacc
gatgcattgaatacgttgggattgatacccaggctgcattgggaccagggcttctgggag
ctttggcagcccggtgaggctggagcccatgaactgttggaaatcttcatcgacggtgcg
ctatccggctatcgcgaaaaccgcgatcggcccgatcgtgtcggcacctcgcagctgtcg
ccgcatctgcacttcggcgagattgcgccgtggcggatcgccagcacgctggaagccaat
cgcaacacgcgtactagcgcagagatcgatggctacatccgtcaattgggctggcgcgat
tttgcctatcacctgctgcatcactttcccgacacgaccaaccagaatctcaatccgcgc
ttcgaaggattcgattgggccaccgtggatccggtcgcgttgcaggcctggcagcgtggt
cgcaccggcattccaatcatcgatgcgggcatgcgccaactctggcacaccggctggatg
cacaaccgcgtgcgcatgatcgtggggagtttgttgtgcaagcatttgcgcatccattgg
atcgaaggtgcgcgctggttctgggacacgctggtggatgcggatctggccaacaacacg
ctgggttggcagtgggtggccggtaccggcgccgatgcagcgccgtatttccgcgtattc
aatccggtgacgcaagcggagaaatttgatccgcaggcggcttacatcacccgctgggtg
ccggagctcggcaagctcgcagtgaaggaacgctttgcaccgtggttgcatccgttgtcg
ctggcacgctgtgcgccggagtacccgcgcacgccgatcatcggtttatcggagggccgc
gatgctgcgttggcggcgtatgcgaagacccgcgggtag
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