Xanthomonas fragariae: BER92_07010
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Entry
BER92_07010 CDS
T04667
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_07010
Enzymes [BR:
xfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
BER92_07010
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
BER92_07010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AOD14528
UniProt:
A0A1Y6HKL1
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All DBs
Position
1541911..1543488
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AA seq
525 aa
AA seq
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MSEFNATAAERTVQMAAHTLRLILGDQLNPQHSWFAAHDAGVVYVLMEVREETDYVLHHA
QKILAIFAAMRAFAAHLRDAGHRVRYVTIDNPSNRHSVPANLDALMAHYQASHLDYQAPD
EWRLDEALQQWCAPRPFATRMVDSAHFLTERDEVAACFRPGSQWRMEVFYRRMRRRHRIL
LDASGEPEGGRWNFDRDNRAAWPGDPPAPQEWRAAHDHRALWRSIEAAGVRSFGSPNADA
LPWPLHRDEALQHLDAFITHALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREVIA
RAEAAWRDGHAPLASVEGFIRQILGWREYVRGVYWSQMPGYAELNHLDQHAPLPRWFWGG
QIGMRCLADVIGNSLANAHAHHIQRLMVIGNFALLAGLDPQALHHWYLGVYIDAFEWVEL
PNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCGGCKYQRKARVGAQACPYNALYWDFL
ARQRTLLQANERLAMPYRQLDDMAPDVLAQVQAQAAHWRANLEAL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttcaacgccaccgcggccgagcgcactgtacaaatggctgcacatacgctg
cgtctgatcctgggcgatcagctcaatccgcagcacagctggttcgctgcgcacgacgca
ggcgtggtttatgtgttgatggaagtgcgcgaggaaaccgactacgtgctgcatcatgcg
cagaagatcctggcgatttttgcggcgatgcgcgcgttcgcggcgcacttgcgagacgcc
ggtcatcgcgtgcgttacgtgacgatcgacaaccccagcaatcggcactcggttcccgcc
aacctcgatgcgctgatggcgcactaccaagccagccatctggattatcaggcgccggac
gagtggcgattggatgaagcattgcagcagtggtgcgcaccccggccgttcgccacgcgc
atggtcgacagcgcgcattttctgaccgagcgcgatgaggtagcggcgtgtttccgcccc
ggcagccaatggcgcatggaggtgttctatcggcgcatgcgacgacggcatcgcatcttg
ctcgacgcttctggcgagccggagggtgggcgctggaatttcgatcgcgacaatcgtgca
gcgtggcccggtgatccgcccgcgccgcaggagtggcgtgctgcacacgatcaccgcgcg
ctgtggcgcagcatcgaggctgcgggcgtgcgcagtttcgggtcgccgaacgccgatgcc
ttgccatggccgctgcatcgcgacgaagcattgcagcatctggatgcgttcatcacgcat
gcgttgccggactttggtcgctacgaggatgcgatgagcacacgcagcccgcggttgttc
cattcgctgctgtcgttcgcgctcaacgtcaagatgttacatccgcgcgaggtgatcgcc
cgtgccgaagccgcgtggcgtgacggacatgcgccgttggcatcggtggaagggtttatc
cggcagattctgggttggcgcgaatacgtgcgtggcgtgtactggtcgcagatgcccggc
tatgcggagttgaatcacctcgatcagcatgcaccattgccgcgctggttttggggtggg
cagatcggcatgcgttgcctggccgatgtgatcggcaattcgctggccaacgcgcacgcc
caccacatccagcggctgatggtgatcggcaatttcgcgctgctggcggggctggatccg
caggcgctgcatcattggtatctgggcgtgtatatcgacgcgttcgaatgggtggagctg
cccaacacggtcggcatgagccaattcgccgatggtggcctgcttggtagcaagccgtat
atcagcggcgcggcctatatcgaccgtatgagcgactactgtggcggctgcaagtaccag
cgcaaggcacgggtcggcgcacaggcctgcccgtacaacgcgctgtactgggatttcctc
gcgcgccagcgcactctgctgcaagccaacgagcggttagcgatgccctaccggcagctc
gacgacatggcgccggacgtgctggcccaggtgcaggcgcaggctgcgcattggcgggcg
aatctggaggcactctga
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