Xanthomonas fragariae: BER92_07170
Help
Entry
BER92_07170 CDS
T04667
Name
(GenBank) transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfr03000
]
BER92_07170
Transcription factors [BR:
xfr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BER92_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_11
HTH_20
MarR_2
HTH_28
HTH_5
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AOD14557
UniProt:
A0A1Y6H093
LinkDB
All DBs
Position
complement(1575227..1576141)
Genome browser
AA seq
304 aa
AA seq
DB search
MSLSLPPLAALRAFEAAARLQSVSRAAQELHVTHGAISRHIRTLEQSLGAALFAKQGRGL
VLTAAGTRLREASSEAFSLLGSAWAELRQRSGDAPLVLGCSGSVLARWVIPRLARLNIDL
PDIRLHLVAQEEDPDEALSGLDAAMLLATSPWPGDWHVHTLGDERIGPVLSPRHPLAATL
QQAPPQALRNAPLLQVRSRPQAWSQWAQQAGVELPDSAFAAEFEHLYYLLEAANAGLGIA
IAPQPLVSEDIVAGRLLAPWGFLATGGQWMLASPRRGKDPRVDRLAHWLQHALESPAQPD
TEGG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctatcacttccgccattagcagcgctgcgcgccttcgaagcggctgcgcgcctg
caaagcgtcagccgggccgcgcaggaactacacgtgacccatggcgctatcagccggcat
atccgcacgctcgagcaatcgctgggtgctgcattgttcgcaaagcaggggcgcggtctg
gtgctgaccgctgcaggcacccgacttcgcgaggccagcagcgaagcattctcgttgctt
ggcagtgcctgggccgaactacgccagcgcagcggcgatgcgccgctggtgctgggctgc
tccggcagcgtgctggcgcgctgggtcatcccgcgcttggccaggctgaacatagatctg
ccggacatccgcttgcacctggtcgctcaggaggaagacccggatgaagcgctttcgggc
ttggacgcagcaatgctgttggcgacatcgccctggcccggcgattggcacgtgcatacg
ctgggggatgagcgcatcggaccagtcctcagcccgcgccacccgctggcggcgacattg
caacaggcaccgccgcaggcattgcgcaacgcgcctttactgcaggtgcggtcacggccg
caggcatggtcacaatgggcgcagcaggcaggcgtggagttgcctgacagcgcattcgcc
gcggaattcgagcatttgtactacctgctcgaagcggcaaacgccgggctgggcatcgcg
attgcaccgcagccactggtctcggaagacatcgtagccggccgactgctggcaccgtgg
ggcttcttggcgactggcggccagtggatgctggctagcccgcgccgcggtaaggacccg
cgcgttgatcggctagcgcattggttgcaacacgctctggaatctcctgcgcaacccgac
accgagggaggctga
DBGET
integrated database retrieval system
