Xanthomonas fragariae: BER92_07335
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Entry
BER92_07335 CDS
T04667
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfr03016
]
BER92_07335
Enzymes [BR:
xfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BER92_07335
Transfer RNA biogenesis [BR:
xfr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BER92_07335
Prokaryotic type
BER92_07335
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AOD14585
UniProt:
A0A1Y6H8G6
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All DBs
Position
1610069..1610995
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AA seq
308 aa
AA seq
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MKPRIVYRPLHGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCLGE
ATKIAGLLLGSVKAYDAEVVLGMTTETDDADGERLRERAVPELSEEALRVALASFVGRIA
QQVPIYSALKQGGEPLYAKARRGEAIDAPVREVDVHAIELIGYSAPRLQLRVTCGSGTYI
RSLARDLGELLGCGAHIASLRRLWVKPFHAPQMITLQALSTALDAGIDAQELLLPIQAGL
ADFARIVLDQAHATRFRMGQRLRDAAFPVGQVAVFGPDGIPSGLGMVDAEGRLSPQRLFN
GLNEVQAY
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgtctatcgcccgttgcatggcatcctgttgctggacaagccagcc
ggactcagctccaacaacgcgttgcaggccgcacgccgtttgttgcgggcagaaaagggc
ggccataccggaagcctggatccgctggccaccggcttgctgccgttgtgtctgggcgaa
gctaccaagatcgccggtctgctgcttggctcggtcaaggcatacgacgctgaggtcgtg
ttgggcatgaccaccgagactgacgatgccgatggcgagcggttgcgcgagcgtgcggtg
ccggaactgagcgaagaagcactgcgtgtggcgctggcgtcgtttgtcggccgtatcgcg
cagcaggtaccgatctattctgcgctcaagcaggggggcgagccgctgtatgccaaggcg
cggcgtggcgaagcgatcgacgcgccggtgcgcgaggtcgatgtgcatgcgatcgaactg
atcggctacagcgcgccgcgcctgcaattgcgcgtgacctgcggctcgggcacttatatt
cgcagtctggcgcgcgatttgggcgaattgctcggatgtggtgcgcatatcgcatcgttg
cgtcggctgtgggtcaagccgtttcatgctccgcaaatgatcacgctccaagcgctgtcc
acagcgctggacgcaggcatcgatgcgcaggagttgttgttgccgatccaagccggtctg
gccgattttgcgcggatcgtactcgaccaggcccatgcgacccgtttccggatgggccag
cgcttgcgcgatgcagcatttccagtcggccaggtggcggtgttcgggcccgatggaatc
ccttcaggcttaggcatggtggacgcggaagggcgtttgtcaccgcagcgtttgttcaat
ggactgaacgaagttcaggcttattaa
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integrated database retrieval system
