Xanthomonas fragariae: BER92_08495
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Entry
BER92_08495 CDS
T04667
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfr03032
]
BER92_08495
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_08495
Enzymes [BR:
xfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BER92_08495
DNA replication proteins [BR:
xfr03032
]
Prokaryotic type
DNA Topoisomerases
BER92_08495
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BER92_08495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AOD14770
UniProt:
A0A1Y6H9U8
LinkDB
All DBs
Position
1870490..1873201
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AA seq
903 aa
AA seq
DB search
MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELGAHSN
KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM
RYTESRMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPSLLVNGSAGIAVGMAT
NIPPHNLTEAINACIALIDTPELDVEGLMKYIPGPDFPTAGIINGTAGIAAGYRTGRGRV
RIRAKADVEVADNGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALIDGRPQLMNLKQMLEAFIRHRREV
VTRRTIYELRKARARAHVLEGLTVALANIDEIIELIKTSSNPQEARERMLAKTWEPGLVG
ALLGAAGAEASKPEDLPPGVGLIKGFYQLSEVQALQILEMRLHRLTGLEQEKLTDEYKQL
LGVIEGLIRILENPDVLLRVIRDELINIREEYGDARRTEIRHSEEDLDILDLIAPEDVVV
TLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTFTSSGKVFW
LPVHQLPEAGSNARGRPIVNWIPLEPGERVQAVLPVREYADNRYVFFATRNGTVKKTPLS
EFAFRLARGKIAIHLDQGDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGV
RGIRLTKGEEVVSLIVSERAGVVEEGGEHEDVDEVVEITDGADATLIEVAESDDMAYILT
ATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDEVLLISDGGTLVR
TRGSEISRVGRNTQGVTLIRLSKGEKLQAVERLDASLDEVEDVVDEATATTATPSTLAPP
TSA
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgccaaggaaatcatccaggtcaatctggaagacgagatgcgcaagagc
tatctcgattacgcaatgagcgtgatcgtgggccgcgcactccccgatgcccgtgatggc
ctcaagccggtgcatcgccgcgtactgttcgcgatgcacgagttgggcgcacacagcaac
aaggcctacttcaagtcggcgcgtatcgtcggcgacgtcatcggtaaatatcacccgcac
ggcgaccagtcggtgtacgacacgctggtgcgcatggcgcagccgttctcgctgcgttac
atgatggtcgatggccagggtaacttcggttcggtcgacggtgactcagccgcagcaatg
cgttacaccgagtcgcgcatgtcgcggttggcgcatgagctgatggccgacatcgacaag
gagaccgtcgatttccagcccaattacgatgaaaaggaactagagccgacggtcatgccg
acccggtttccgagcctgttggtcaacgggtcggccggtattgcggtgggtatggccacc
aatattccgccgcacaatctgaccgaagcgatcaacgcatgcatcgcgttgatcgacacg
ccagagttggatgtcgaaggcttgatgaagtacatccccggcccggatttccccaccgcc
ggcatcatcaatggcactgccggcatcgctgccggttaccgcaccggccgtggtcgggtg
cgcatccgtgccaaggccgatgtggaagtggccgacaacggtcgcgaagcgatcgtcgtt
actgagatcccgtatcaggtcaacaaggcgcggctgatcgaaaaaatcgccgagctggtg
aaggaaaagaagctcgaaggcatcagtgagctgcgcgatgagtccgacaaggacggtatg
cgcatctacattgaaatcaagcggggcgagtctgccgaggttgtgctcaacaacctgtat
cagcagacccagatggagtcggtgttcggcatcaacatggtggcgctgatcgatggccgc
ccgcagttgatgaacctcaagcagatgctggaggcgttcatccgccatcggcgcgaggtg
gtcacccgtcgcaccatttacgagttgcgcaaggcgcgggcacgtgcgcatgtgctggaa
ggtttaaccgtcgcgttggccaacatcgacgagattatcgagttgatcaagacctcgtcc
aacccgcaggaagcccgtgagcgcatgctggccaagacttgggaaccgggtcttgtcggt
gcgctgttgggtgcggccggtgccgaagcctccaagccggaagatctgccgccgggtgtg
ggcctgatcaagggtttctatcagctcagtgaagtgcaggccttgcagatcctggaaatg
cgtctgcatcgcctcaccgggttggaacaggaaaagctgaccgacgagtacaagcaatta
ctcggagttatcgaaggactgatccgcatcttggaaaaccccgacgtgctgctgcgggtg
atccgcgatgagctgatcaatatccgcgaagagtacggcgatgcgcgtcgcaccgaaatt
cgtcacagcgaagaagatctggatattctcgatctgatcgcgccggaagacgttgtggtg
acgctctcgcacgccggttatgccaagcgtcagccggtgagtgcgtatcgcgcgcagcgc
cgtggtggccgtggtcgttctgctgcagcgaccaaggaagaagatttcatcgatcagctg
tggttggtcaacacgcatgacacgctgttgaccttcaccagcagtggcaaggtgttctgg
ctgccggtgcatcagttgccggaggccggctccaacgcgcgcggccgccccatcgtcaac
tggattccgctggaaccgggcgagcgtgtgcaggccgtgctgccggtgcgcgaatatgcc
gacaaccgctatgtgttctttgccacgcgcaacggcacggtcaagaagaccccgctgagc
gaattcgcattccgtctggcacgcggcaagatcgccatccacctcgaccagggcgatgcg
ctggtgggtgtggcgttgaccgatggcgatcgcgacgtgttgttgttcgcctccaacggg
aagaccgtgcgctttggcgaatctaccgtgcgttcgatgggccgcaccgccaccggcgtg
cgcggtattcgtctgaccaagggcgaagaggtggtcagcctgatcgtttccgagcgtgct
ggcgttgtcgaagaggggggcgagcacgaggacgtggacgaggtggtcgaaattaccgac
ggcgccgacgccacgttgatcgaggtcgccgagagcgacgacatggcctacatcctcacc
gcaaccgagaacggctacggcaagcgcacgccgcttgcggagtatccgcgcaagggccgc
ggtacgcagggcgtgatcggcattcagacgaccgagcgtaacggtaagttggtgcgtgcg
gtgctgttgggcgctaccgatgaagtgctgctgatttccgatggcggtaccttggtgcgc
acacgcggttcggagatttcgcgcgtcggtcgcaacacgcagggcgtcacgctgatccgt
ttgtccaagggcgaaaagctgcaggcggtcgaacggttggatgcctcgctggacgaggtg
gaagatgtggtggacgaagcgacagcaaccaccgcaaccccaagcacgttagcgccgccg
accagtgcgtga
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