Xanthomonas fragariae: BER92_08740
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Entry
BER92_08740 CDS
T04667
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00541
Biosynthesis of various nucleotide sugars
xfr01100
Metabolic pathways
xfr01250
Biosynthesis of nucleotide sugars
Module
xfr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BER92_08740
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xfr01005
]
BER92_08740
Enzymes [BR:
xfr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
BER92_08740
Lipopolysaccharide biosynthesis proteins [BR:
xfr01005
]
Lipid A
BER92_08740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOD14813
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All DBs
Position
1923524..1924357
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AA seq
277 aa
AA seq
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MKLCDFEVGLDQPLFLIAGPCVIESMQLQLDVAGKLKEITGKLGINFIFKSSFDKANRTS
GTSFRGPGLEEGLKVLDAVKKQIGVPVLTDVHEYTPMNEVAAVVDVLQTPAFLVRQTDFI
KNVCAAGKPVNIKKGQFLAPWDMKPVVDKAKSTGNEQIMVCERGASFGYNNLVSDMRSLS
VMRDTGCPVVFDATHSVQLPGGQGSSSGGQREFVPVLARAAVAVGISGLFAETHPDPSKA
LSDGPNAWPLDKMEALLETLLALDTITKRSSFLEQSV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctgtgacttcgaagttggcctggatcagccgttgttcctgattgccggaccc
tgcgtgatcgagtcgatgcaattgcagctcgacgtggctggcaagctcaaggaaatcacc
ggcaagctggggatcaacttcatcttcaagtcgagcttcgacaaggccaatcgcacctcc
ggcaccagcttccgtggccctggcctcgaagaaggtttgaaggtgctggatgcggtgaag
aagcagatcggcgtgccggtgctcaccgacgtgcacgagtacaccccgatgaacgaagtt
gccgccgtcgtcgacgtgctgcagaccccggcctttctggtgcgccagaccgacttcatc
aagaacgtctgcgctgccggcaagccggtgaacatcaagaagggccagttcctggcgcct
tgggacatgaagccggtggtggacaaggccaagtcgaccggcaacgagcagatcatggtc
tgtgagcgtggcgcttcgtttggctacaacaatctggtcagcgacatgcgctctctcagc
gtcatgcgcgacaccggttgcccggtcgtgttcgatgccacccattcggtgcagttgccg
ggcgggcagggcagcagttccggtggccagcgcgagttcgtgccggtgttggcgcgcgct
gctgttgcggtgggcatttcaggtctgtttgcggaaacccatccggatccgtccaaggcg
ctgtccgatggtcccaatgcctggccgctggacaagatggaagccttgcttgaaacgctg
ctcgcactggacaccatcaccaagcgcagcagttttctcgaacaaagcgtctga
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