Xanthomonas fragariae: BER92_08935
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Entry
BER92_08935 CDS
T04667
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfr03000
]
BER92_08935
Transcription factors [BR:
xfr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BER92_08935
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
MarR_2
HTH_3
HTH_31
HTH_7
TetR_N
HTH_DeoR
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AOD14844
UniProt:
A0A1Y6H7K7
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All DBs
Position
1958265..1959287
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AA seq
340 aa
AA seq
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MAKGAVTIKDVAREAQVSVATVSRALNGHHNVAVSVRQQVLEVAQRLRYSPHAAARSLSS
RRTQTLGVVLPDLYGEFFSELIRGIDGAARAAGQYLLVSSYHGDPEAQGRALRAMRGRVD
GLLVLSPYAEQPGFLTDNLPQALPTVLINAHLPGADYPVLSIDDHTGAMTMTEHLLRAGH
RRIAFIGGPALNFDARERLRGFRDALAAHGDQAQGIEYPGDFDEASGYRAGLAMLADGAL
PDAVFAANDMTALGCLYAFAQADVSVPGDVALAGFDDIPLARFVHPALTTMRVSIARLGE
QAMTRLMRLVDQPGCDDGIRQLLAPELVIRASCGADEPGP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccaagggtgcggtgaccatcaaagatgttgctcgggaagcacaggtctctgttgca
accgtgtcgcgtgcgctcaatggtcaccataacgttgccgtgtcggtgcgccagcaggtg
ctcgaagtggctcagcggctgcgttacagcccccatgcggccgcacgcagtttaagcagc
cggcgcacgcagaccctgggcgtggtactgcccgacctgtacggcgagttcttttccgaa
ttgatccgcggtatcgatggcgccgcgcgtgccgccggtcagtatttgttggtgtccagt
tatcacggcgacccggaagcgcagggcagggcgctacgcgcgatgcgcggacgcgtagat
ggactgctggtgttgtcgccgtatgccgagcagccggggtttctcaccgacaacctgccg
caggcgttgccgacggtgctgatcaacgcgcatctgccaggcgcggattacccggtattg
agcatcgacgaccataccggcgcaatgaccatgaccgagcacctgctgcgtgccggccac
cggcgtatcgccttcatcggcggcccagcgctcaatttcgatgcacgcgaacgcctgcgc
ggttttcgcgatgcgctcgctgcgcatggcgaccaggcgcaaggcatcgaatatccgggc
gactttgatgaagcctctggttaccgcgccgggctggcgatgctagccgatggcgcgctg
cccgatgcggtgttcgccgccaacgacatgaccgcgctgggttgtctgtacgcgtttgct
caggccgacgtgtcggtgcccggcgacgtggctctggccggtttcgacgatattccattg
gcccgtttcgtccatccggcactgaccacgatgcgggtcagcattgcgcgcctgggcgag
caggcgatgacccggctgatgcggctggtggaccagcctggctgcgacgacggaatccgc
caactgctcgcacccgagctggtgattcgtgcctcctgcggtgccgacgagccaggcccc
tga
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