Xanthomonas fragariae: BER92_09320
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Entry
BER92_09320 CDS
T04667
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00280
Valine, leucine and isoleucine degradation
xfr00650
Butanoate metabolism
xfr00907
Pinene, camphor and geraniol degradation
xfr01100
Metabolic pathways
xfr01120
Microbial metabolism in diverse environments
xfr04146
Peroxisome
Module
xfr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BER92_09320
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BER92_09320
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BER92_09320
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BER92_09320
Enzymes [BR:
xfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
BER92_09320
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AOD14907
UniProt:
A0A1Y6H6S5
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Position
complement(2042077..2042973)
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AA seq
298 aa
AA seq
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MNDFVRIVEVGPRDGLQNEAQQIATADKIALIDQLSATGLRTIEATSFVSPRWVPQLADA
AEVFAGVAQVPGIAYPVLVPNLQGYTRARAACAQEVAVFTAASETFNRTNTNAGIEESIE
RFRPILEQAVLDGVRVRGYVSTVLGCPYQGEVPVADVVDVAQRLYALGCYEVSLGDTIGV
GTPVRARQMLAAVAQAVPMSALAVHFHDTYGQALANIAACLEQGVRVVDSAVSGAGGCPY
AKGASGNVASEDVVYLLHGSGMQTGIDLPALARTGRWLAQLLGRDTGSKVGKALAAAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacttcgtccgtattgtcgaagtcggcccgcgcgacggcttgcagaacgaggcg
cagcagatcgccactgccgacaagatcgcgctgatcgatcagctgtcggccaccggcttg
cgcaccatcgaggcaaccagtttcgtcagcccacgctgggtgccgcagctggccgatgcg
gccgaggtgttcgccggcgtcgcgcaagtgccgggcatcgcctacccggtgctggtgccg
aatttgcaggggtatacgcgtgcacgcgcggcctgtgcgcaggaagtggcggtgttcacc
gcggcgtcggagacgttcaatcgcaccaataccaatgccggcatcgaggaatcgatcgag
cggtttcgcccgatcctggaacaagccgtcctcgatggcgtgcgcgtgcgcggctatgtc
tccaccgtgttgggttgcccgtatcaaggcgaggtgccggtggccgacgtggtcgatgtc
gcgcaacggctgtacgcgctgggctgctacgaagtttcgctgggcgacaccattggtgtc
ggcacgccggtcagggcgcgccagatgttggccgctgtggcgcaggcagtgccgatgtcg
gcgttggccgtgcattttcacgacacctatggccaggcgctggccaacatcgccgcctgc
ctggaacagggcgtgcgcgtggtcgattcggcggtgtccggcgctggcggttgcccgtac
gccaagggcgccagcggcaacgtcgccagcgaagacgtggtctatctgctgcatggatcg
ggcatgcagaccgggatcgacctacctgcccttgcccgcaccggccgctggttggcgcag
ttgctcggtcgcgacaccggcagcaaggtcggtaaggcgttggcggctgcaggctga
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