Xanthomonas fragariae: BER92_09425
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Entry
BER92_09425 CDS
T04667
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00061
Fatty acid biosynthesis
xfr00071
Fatty acid degradation
xfr01100
Metabolic pathways
xfr01212
Fatty acid metabolism
xfr02024
Quorum sensing
xfr04146
Peroxisome
Module
xfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BER92_09425
00071 Fatty acid degradation
BER92_09425
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BER92_09425
09145 Cellular community - prokaryotes
02024 Quorum sensing
BER92_09425
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xfr01004
]
BER92_09425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xfr04147
]
BER92_09425
Enzymes [BR:
xfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BER92_09425
Lipid biosynthesis proteins [BR:
xfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BER92_09425
Exosome [BR:
xfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
BER92_09425
Exosomal proteins of breast cancer cells
BER92_09425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AOD14925
UniProt:
A0A1Y6H6U0
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All DBs
Position
complement(2066482..2068167)
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AA seq
561 aa
AA seq
DB search
MNQQARLWLQSYPSGVAAEIDLEQFRTVTEVFATSVARFADRPAYHSYGKTITYREADQL
VDQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGILRAGLTVVNVNPLYTPRELKHQL
VDSGATVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAAVVNFVVKYIKKLVPD
YRIKGAMRFREALALGRKHTVPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQ
AHQWLAGTGKLEEGNEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKEL
KKTRFTAITGVNTLFNGLLNTPGFDAVNFSSLKMTLGGGMAVQRSVAERWKKVTGLTLVE
AYGLTETSPAACINPMNLKDYNGSIGLPISSTDACIKDDAGVVLPQGEIGELCIKGPQVM
KGYWKKPEETANVMDAEGWLHSGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVI
AELPGVLEVAAVGVPDEKSGEIVKAVVVKKDPALTAEDVKAYCRANLTGYKQPRVIEFRK
ELPKTNVGKILRRELRDAAKE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaggcacgtctttggttgcaaagctatccgtccggcgtcgccgcggagatc
gatctggagcagttccgcaccgtgacagaggtgttcgccacctcggttgcgcgttttgcc
gaccgccccgcctaccacagttacggtaagaccattacctatcgcgaagcggatcagttg
gtcgatcaattcgccgcctatctgctcggcgaactgcagttgaagaaaggcgaccgcgtc
gctttgatgatgcccaactgcctgcaatatccgatcgccacgttcggcattttgcgtgcc
ggcttgaccgtggtgaacgtcaatccgctatacaccccgcgcgagctcaagcatcaattg
gtcgactccggcgccactgtgctggtggtcatcgacaacttcggcactaccgtgcagcaa
gtcattgccgacacgccggtcaagcaggtgatcaccaccggcctgggcgacatgctcggg
ttcccgaaagcggccgtggtcaacttcgtcgtcaagtacatcaagaagttggtgccggat
tatcgcatcaaaggcgcgatgcgtttccgcgaggcgctggcactgggccgcaagcacacg
gtgccgacgctgcagatcgagcccgacgacatcgcttttctgcaatacaccggcggcacc
accggcgtggccaagggcgcgatgctgacgcaccgcaatctggtggccaacatgcaacag
gcgcaccagtggctcgcgggcactggcaagttggaagaaggcaacgaggtggtgatcacc
gcgctgccgctgtatcacatcttcgcgttgacggcgaacggcctggtcttcatgaagatc
ggcggctgcaatcatctcatcagcaacccgcgcgacatgcccggattcgtcaaggaactg
aaaaagacacgcttcaccgcgatcaccggcgtcaacacgctattcaacggtttgctcaac
acgcccggcttcgacgcggtgaatttttcctcgctcaagatgactctgggcggcggcatg
gcggtgcagcgctcggtcgccgaacgctggaagaaggtcaccggcttgaccctggtcgag
gcctacggcctgaccgagacctcgccggctgcctgcataaacccgatgaatctgaaggac
tacaacggctcgatcggcctgccgatttcgtccaccgatgcctgcatcaaggacgacgct
ggcgtagtgctgccgcagggcgagatcggcgagctgtgcatcaagggcccgcaggtaatg
aaaggctattggaagaagcccgaagaaaccgccaatgtcatggatgccgagggctggctg
cacagcggcgatatcgcgcgaatggacgagcaaggtttcgtctatatcgtcgatcgcaag
aaggacatgatcctggtgtccggcttcaacgtgtatcccaacgagatcgaagacgtgatc
gccgagttgcccggcgtgctggaagtggcagccgtgggcgtaccggacgaaaaatccggc
gagatcgtcaaggccgtggtcgtaaagaaggaccccgccctgaccgccgaggatgtgaag
gcttactgccgcgccaacctgaccggttacaagcagccgcgagtgatcgaattccgcaag
gaactaccgaaaaccaacgtcggcaagatcttgcgccgcgaattgcgggatgcggccaag
gagtga
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