Xanthomonas fragariae: BER92_09460
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Entry
BER92_09460 CDS
T04667
Name
(GenBank) c-di-GMP phosphodiesterase
Organism
xfr
Xanthomonas fragariae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
GAF
GAF_2
PAS_3
PAS_8
PAS_7
PAS_12
Motif
Other DBs
NCBI-ProteinID:
AOD14930
UniProt:
A0A1Y6H6T4
LinkDB
All DBs
Position
complement(2076360..2078672)
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AA seq
770 aa
AA seq
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MREPVSAIAADVLADSAAATTGPIKTDPITAGAIEPGPVTAGVAKAGEQPQECRSRLLAE
ALDGSSSAILICDLQSRLLFANDGFQRMFGYTEAELVGQIPSHVLTRAQSDHSEVARIRE
RADALQQSQADLLVYRKDGTPLWISLNFNPIYDADQNPSHYVTVLTDITDTKVHEVLQHR
VLEALVQERPLIEVMTLICTEVERIAPDVLATVMSADNHGCLQTLAAPSLPPEYADAVNG
LKIGPGASACGTAAWRGRAVMVEDIATDPLFAPYRDTLLQMGLRACWSTPIRSNSSRVLG
TFALYYRKPQRADAWHVRLTELCQQLCTLALEREQIRQRVHQLAFYDTLTGLPNRLMFSA
RAEQALTQAEYAGEPAALMFINIDRFKLINDSQGHSAGDGLLRDIALRIGDQLSATAMLA
RLAGDEFALALPQCSAEQAGAVAERLLGTIAGPLPVGHMTVHPSASIGVAMFPEDGREIN
ILLRHADLAMNRAKKEGGGRFRFFSSDMNRMAQERVALEAELRQAIGRNQLQLHYQPQLL
SAAPHALYGVEALLRWNHPQLGTISPARFLPVAEEQGMMPQLNDWVLRSACRQIADWRHR
GVPVARVSVNLSASSFESPRMLVDLLRLISDMGVLPSDLTLEMTESVMLSGQPDVLENLH
AIREAGISLSLDDFGTGYSSLSHLHRLPIDELKLDMSFVRDIEHSEDARALITSVLRIGA
HLRKHVVAEGVENEAQRLFLADLGCEVLQGYLFSRPLPAAALEAWLSAQP
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaacccgtctcagctatcgctgcggacgtgctggccgatagcgcagcagcaacc
actggcccaatcaagaccgacccgatcactgctggcgcgatcgagccgggccccgtcact
gccggcgtggcgaaggccggcgagcagccccaagaatgccgttcgcgcctgctggccgaa
gcgttggatggcagcagtagcgccatcctcatctgcgatctgcaatcgcgtctgctcttc
gccaacgacggtttccagcgcatgttcggctacaccgaagccgaattggtcggtcagatc
ccatcgcatgtgctgacccgggcgcaaagcgaccatagcgaagtggcgcgcatccgcgaa
cgcgccgatgcgttgcagcagagccaggccgacttgctggtctatcgcaaggacggcaca
ccgctatggatttcgctcaacttcaatccgatctacgacgccgaccagaatccatcgcat
tacgttacggtgctgaccgacatcaccgataccaaggtgcatgaggtattgcagcaccgc
gtgctggaagcactggtacaagagcggccgctgatcgaagtgatgacgctgatctgcacc
gaggtcgaacgcatcgcaccggacgtgctggccacggtgatgagtgccgacaatcatggc
tgcctgcaaacgctggctgcccccagcctgccacccgaatatgccgacgcggtcaacgga
ttgaagatcggccctggcgccagcgcatgcgggactgccgcctggcgcggccgtgcggtg
atggtggaagacatcgccaccgacccgctgttcgcgccgtatcgcgacaccctgttgcag
atgggattacgcgcctgctggagcaccccgatccgctccaacagctcgcgcgtgctcggt
accttcgcgctgtactaccgcaagccgcagcgcgccgacgcctggcatgtgcgactcacc
gagttatgccaacagctgtgcacactggcactggaacgcgagcagatccgccaacgcgtg
catcaattggcgttctacgacacgctcacaggcctgcccaaccgcctcatgttcagcgcg
cgcgccgaacaggcactgacacaggccgaatacgcaggcgaaccggccgcgttgatgttc
atcaatatcgatcgcttcaagctgatcaacgatagtcagggccactccgcaggcgatggt
ttgttacgcgacatcgcgctgcgtattggcgaccaactttccgccaccgcaatgctggcg
cgcctggccggcgacgaattcgcacttgcactgccgcagtgcagtgcagagcaggccggt
gccgtagccgagcgcctgcttggcaccatcgcaggcccgctgccggtcggacatatgacc
gtgcatccgtcggccagcatcggcgtggcgatgtttcccgaagacgggcgcgaaatcaac
atcctgctgcggcatgccgatctggcaatgaatcgcgccaagaaggaaggcggcggacgt
ttccgttttttcagctccgacatgaaccgtatggcgcaggagcgcgtcgcgctggaagcg
gaactgcgccaggcgatcggtcgcaatcagctgcaactgcattaccaaccgcaattgctt
agcgccgcgccgcacgcgctgtatggtgttgaagcgttgctgcgctggaatcatccgcag
cttggcaccatttcgccggcccggtttctgcccgttgccgaagaacaaggcatgatgccg
cagctaaacgattgggtgctgcgcagtgcgtgtcggcagatcgccgattggcgccatcgc
ggcgttccggtagcgcgcgtctcggtgaacttgtcggccagcagtttcgaaagcccgcgc
atgctcgtcgatctgctccggttgatctccgacatgggcgtgctgccgtccgacctgacc
ttggaaatgaccgagagcgtgatgctttccgggcaacccgacgtactggaaaatctgcac
gccattcgcgaagccggcatctcgttgtcgttggacgacttcggcaccggctactccagc
ctgagccatctgcatcgcctgccgattgacgaactcaaactggacatgagcttcgtacgc
gacatcgaacacagcgaggacgcacgcgcgctcatcacctcggtgctacgcatcggcgcg
catctgcgcaagcacgtggttgccgaaggtgtggaaaacgaagcgcagcggttgtttctc
gccgatctcggctgcgaagtcctacaaggctatctgttctcacgcccgttgccggctgcg
gcgctggaagcgtggctgagtgcgcagccgtag
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