Xanthomonas fragariae: BER92_10065
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Entry
BER92_10065 CDS
T04667
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xfr03009
]
BER92_10065
Ribosome biogenesis [BR:
xfr03009
]
Prokaryotic type
GTPases
BER92_10065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
GTP_EFTU
KH_dom-like
RsgA_GTPase
Dynamin_N
AIG1
MeaB
Ras
TniB
PduV-EutP
MMR_HSR1_Xtn
Roc
AAA_22
ABC_tran
cobW
NTPase_1
AAA_16
KTI12
MobB
Motif
Other DBs
NCBI-ProteinID:
AOD15025
UniProt:
A0A1Y6HJN6
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All DBs
Position
complement(2215728..2217125)
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AA seq
465 aa
AA seq
DB search
MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDGERPFIVVDTGG
IGGDEEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVINK
IDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLEEVGARLPEKGAGELLDTDPARVR
IAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDMDRDGRQYRLIDTAGLRRRG
KVEEAVEKFSAFKTLQAIEQCQVAVLMLDAGEGVTDQDATILGAILDAGRALVVAINKWD
GQTEYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHEFSTSEV
NQALEIAYGTNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYLENFFRK
RFKLVGTPVRFIFREGANPYEGKRNTLSDRQVARKRRLMRHVKGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctggtcgccctggttggacggcccaatgtcggcaagtccaccatttttaac
gcgctgacgcgtacccgtgacgcgctggtccacgaccagcctggggttacccgcgaccgc
aattacggggtctgccgtctcgacggggagcgccccttcattgtcgtcgacaccggcggt
atcggcggcgatgaggaaggccttgccggcgccaccgcgcgtcaggcacgtgctgccgct
ggcgaagcggatctggtgctatttgtggtcgatggccgcgaaggcgcgtcctcactcgat
gacgagattctggcctggctgcgcaagctggcacggccgaccgtgctggtcatcaacaaa
atcgacggcaccgacgaagaaaccgtgcgctcggaattcgcgcgttacggcttctccgat
gtggtggcgttgtctgccgcgcatcggcagggcattgacgaattgctcgaagaagtcggt
gcacgcctgcctgagaaaggcgccggcgagttgctcgataccgatccggcgcgtgtgcgc
atcgcctttgttggccgtccaaatgtgggcaagtcgaccctggtgaaccgtctgctcggc
gaggaacgcatgatcgcttccgaagtgccgggcaccacgcgcgactcgatcgccgtggac
atggatcgcgatggtcgccaataccgactgatcgacacggccggcctgcgccgtcggggc
aaggtcgaagaggcggtagagaagttcagcgcgttcaagaccctccaggcaatcgagcaa
tgccaggttgcggtgttgatgctcgatgcgggcgaaggcgtgaccgaccaggatgcaacc
attcttggcgcgattctggacgctggtcgtgccttggtcgtggcgatcaacaagtgggat
gggcagaccgaataccagcgtgcgcaggccgaagatctgctgtcgcgcaagctgggtttc
gtcagctgggccgaggcggtgcggatttctgcgctgcatggctcgggcatgcgcgagttg
ttccaggcgatccatcgtgcacacgcatcggccacgcatgaattcagcaccagcgaagtc
aatcaggcgctggaaatcgcctacgggaccaatccgccgccgagcatccgtggacatgtt
tccaagctgcgctacgttcatccgggcggcgccaatccgccgactttcatcgtgcatggc
acgcggttgaaggtgttgccggagtcgtacaagcgctacctggaaaacttcttccgtaag
cgcttcaagctggttggtacgcccgtgcgttttatcttccgcgaaggtgccaatccgtac
gaaggcaagaggaacacgctctccgaccggcaggttgcgcgcaagcggcgcttgatgcgg
cacgtcaagggcaagtaa
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