Xanthomonas fragariae: BER92_10105
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Entry
BER92_10105 CDS
T04667
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00071
Fatty acid degradation
xfr00362
Benzoate degradation
xfr00650
Butanoate metabolism
xfr01100
Metabolic pathways
xfr01120
Microbial metabolism in diverse environments
xfr01200
Carbon metabolism
xfr01212
Fatty acid metabolism
Module
xfr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BER92_10105
09103 Lipid metabolism
00071 Fatty acid degradation
BER92_10105
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BER92_10105
Enzymes [BR:
xfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BER92_10105
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
ApbA
NAD_binding_2
Shikimate_DH
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AOD15032
UniProt:
A0A1Y6HDA8
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All DBs
Position
2223248..2225620
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AA seq
790 aa
AA seq
DB search
MSNPLLVRRAAVLGAGVMGAQIAAHLTNAGVDTVLFDLPAKEGHAEGVVLNAIANLGKLR
PAPLASKALAEAITPANYQSGLEQLRDCDLIIEAIAERMDWKQDLYKKIAPFVADHAVLA
SNTSGLGINKLSDVLPEQLRHRFCGVHFFNPPRYMHLAELIPAKGTDKAVLGGLESFLVT
TLGKGVVYAKDTPNFIGNRIGVFSILSTIHHTAEFGLGFDEVDALTGPLVGRPKSATYRT
SDVVGLDTMAHVIKTMGDTLPNDPWHQHFKSPKWLDALIAKGALGQKVGAGIFRKDGKDI
VVLDLQKQDYRNADRSAAPDVVEILEIKTPAEKFAKLRESQHPQAQFLWATFRDLFHYSA
FHLADIAETARDVDLAIRWGYGWSLGPFETWQAAGWKQVAQWIAEDISSGKSMSSTPLPN
WVFDGRDGVHAAEGSYSPARDAQLPRSALPVYKRQRFPDPLLGEQFSAGETVFDNDGVRM
WHDGDDIAVVSFKTKMNTVSDHVLNGLQEVIGRAEKDFAGLVIWQQKEPFSAGADLAGAL
GLLQAGKVDAFDAMVANFQATSQRIKYAQVPVISAVRGLALGGGCEFQMHSAKAVASLES
YIGLVEAGVGLLPAGGGLKEIAVRASHAAGAGGDVFAELKKTFETVAMAKVSNSAVNAQE
LGLLRATDKIVFNSFEALHIAKAEARARAEGGYRAPLPARRIQVAGNVGIATFKMLLVNM
LEGRFISEYDYEIATRIATVMCGGEVDRGALVDEEWLLKLERTHFVELAQQEKTQARIGH
MLKTGKPLRN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccgttgctagtccgtcgtgccgccgtgctcggtgccggcgtcatgggtgcg
cagatcgccgcgcacctcaccaatgctggtgtcgacaccgtgctgttcgacttgcctgcc
aaggaaggtcatgccgaaggtgtcgtgctcaatgccatcgccaacctcggcaagctccgc
cctgccccgctcgccagcaaggcgttggccgaggcgatcacgccggccaattaccagagc
ggtctggaacaactgcgcgactgcgatctgatcatcgaggcgatcgccgagcgcatggac
tggaagcaggacctgtacaagaagatcgctccgttcgtggccgatcatgccgtgctggca
tcgaacacctcgggcttgggcatcaacaagctctccgacgtgctgcccgagcaattgcgc
caccgtttctgcggtgtgcatttcttcaatccgccgcgctatatgcacctggccgagctg
atcccggccaagggcactgacaaggccgtgttggggggcctggagagcttcctggtcacc
acgctcggcaagggcgtcgtgtatgcgaaggacacgccgaacttcatcggcaatcgtatc
ggcgtgttctcgatcctgtccaccatccatcacaccgccgagttcggtttgggcttcgat
gaagtcgatgcgctgaccggcccgctggttgggcgcccgaagtcggcaacctaccgtact
tcggacgtggtcggcctggacaccatggcgcacgtgatcaagaccatgggcgacaccctg
cccaacgatccgtggcaccagcatttcaaatcgccgaagtggctggacgcgctgatcgcc
aagggcgcgctaggccagaaggtcggcgccggtatcttccgcaaggacggcaaggacatc
gtggtgctggatctgcaaaagcaggattacagaaacgccgatcgcagcgctgcgccggac
gtggtcgaaatcctcgagatcaagaccccggccgaaaagttcgccaagctgcgcgaaagc
cagcatccgcaggcacagttcctatgggccacatttcgcgacctgttccactatagcgcc
ttccatctggccgatatcgcagaaactgcgcgcgacgttgacctggcgattcgctggggt
tacggctggtcgctgggcccgttcgaaacctggcaggccgcaggctggaagcaggttgct
cagtggattgccgaggatatttccagcggcaagagcatgagcagcacgccgttgcctaac
tgggtgttcgacggccgcgatggcgtgcacgccgccgaaggctcttacagccccgcgcgt
gatgcccagctgccgcgctcggcgctgccggtgtacaagcgccagcgcttccccgatccg
ttgttgggcgagcagttctcggcgggcgagaccgtattcgacaacgatggcgtgcgcatg
tggcacgacggcgacgacatcgcggtggtcagcttcaagaccaagatgaacaccgtctcc
gatcacgtgctcaatggcttgcaggaagtcatcggacgggccgagaaagacttcgccggg
cttgtgatctggcagcagaaggagccgttctccgccggcgccgatctggccggcgcgctg
ggtctgctgcaggccggcaaggtcgatgcattcgatgccatggtcgccaacttccaggcc
accagtcagcgcatcaagtatgcgcaggtgccggtgatttcggcagtgcgcggcctggca
ctgggtggcggctgcgagttccagatgcacagtgccaaggctgtggcatcgctggaaagc
tatatcggactggtggaagccggcgtcggtctgttgccggcaggtggcggtttgaaagaa
atcgcggtgcgtgcctcccacgccgctggcgctggcggcgatgtgttcgccgaactgaag
aagaccttcgagaccgtggcgatggccaaggtgtccaactcggcagtcaacgcccaggaa
ctgggcctgttgcgcgcgaccgacaaaatcgtgttcaacagcttcgaagcgttgcatatc
gccaaggccgaagcgcgcgcacgagccgaaggcggctaccgcgcaccgctgccagcacgc
cgcatacaggtcgccggcaatgtcggtatcgccaccttcaagatgctgctggtcaacatg
ctggaaggccgtttcatcagcgaatacgactatgaaatcgccacccgcattgcaacggtc
atgtgcggcggtgaagtcgatcgcggcgcactggtcgacgaagaatggctgctcaagctg
gagcgcacgcacttcgtcgaactggcccagcaagaaaagacccaggcacggattgggcac
atgctcaagacgggcaagccgttgaggaactga
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