Xanthomonas fragariae: BER92_10785
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Entry
BER92_10785 CDS
T04667
Name
(GenBank) type IV secretion system protein VirD4
Organism
xfr
Xanthomonas fragariae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
DEAD
CDC48_N
Motif
Other DBs
NCBI-ProteinID:
AOD15138
UniProt:
A0A1Y6HQ21
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Position
2387610..2389415
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AA seq
601 aa
AA seq
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MGMKARLGTALALLLLAAFAGLYLSGYITLQLLKLNIPLEWSTYTQYVRALGLPQVRPYA
MKIRIGGMLGFGLMFMLWLPLALMLLRLSKRDASLHGDAGFARLHDMKRADLLEKKPESI
VVGKYRGRYLYINDARHVMVVAPTRSGKTTCIAIPVLLTYEHSMCVLDIKGELFKETSGW
RASQGQRIYKFAPYATDGKTHRFNPLSFVRPGQYIADLQTIAAILYPDDSAKDPFWATQA
RAIFVAFASFMFENWNDMERTGFPGTNAQAKPDSPTPLDPNVHPAFPSFERILRLSSGAG
SKGVKRMVERWLSASGQQQFPFVSEQTRTTLRNLAGMAEQTFSSVIATMQAPLQQFLNPI
LAAATNATDFDVTAIRKRKTTIYTVIPAQKLDESGKLLNIFFSTVIGNNLDRQLGDDPSL
KYQMLMLMDEFTAMGRMDVWAKRISISASYGVRDLCIIQSNAQLRSVYGEHDAQNFTTNH
AGSAVYTPREQTDANSYSEQLGFKTIRRKHRSHGSGAQGSSYNINYTEEKRALMLPQELK
ELPNDDALLFLEGCKPIRCKKNWFFKDTFFKKRILPPVEITPMVVIRDQRTGAGKDVPFV
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgaaggcccgtttaggaaccgcactggctttgcttctactcgccgcattcgct
ggcctgtacctgtccggttacatcaccttgcaactgctcaagctcaacattccgcttgag
tggagcacctacacccagtacgtccgcgccctgggcctgccgcaagtccgcccgtacgcg
atgaagatcaggatcggcggcatgctgggcttcggcctgatgttcatgctttggctgccg
ttggccctgatgctcttgcgactgagtaaacgcgatgcgtctctgcatggcgatgccggt
tttgcccgcctgcacgacatgaagcgggctgacttgttggagaaaaaaccggagagcatc
gtcgtcggcaagtaccgggggcgttacctctacatcaacgatgcgcgccacgtgatggtg
gtggcgcccacccgcagcggcaagaccacctgcatcgccattccggtgctgctgacctac
gagcactcgatgtgcgtgctcgacatcaagggcgagttgttcaaggaaaccagcggctgg
cgggcctcgcaaggacagcgtatctacaagttcgccccttatgccaccgatggcaaaacc
cacagattcaatccgctgtcctttgtcaggccgggccagtacatcgccgacctgcaaacg
atcgccgccatcctctacccggacgactccgcaaaggacccgttctgggcgactcaggcc
cgtgccatctttgtcgccttcgcttcgttcatgttcgaaaactggaacgacatggaacgt
acgggtttcccaggaaccaacgcacaagcaaagcccgactccccaacacctctcgatccc
aacgtgcatcctgcgtttccgagcttcgaacgcattctgcggctctcgtccggtgcaggg
agcaagggcgtcaaacgtatggtcgaacgctggctgtcggcctcgggccaacagcagttt
cccttcgtcagcgagcagacccgcaccaccctgcgcaacctggcagggatggccgagcag
accttctccagcgtcatcgccaccatgcaggcgccgttgcagcagttcctgaatccgatc
ctggcagcggccaccaatgccaccgacttcgatgtgaccgccatccgcaagcgcaagacc
accatctacacggtcattcccgcccagaaactcgacgaaagcggcaagttgctgaacatt
ttcttcagcaccgtgatcggtaacaatctggacaggcaactgggcgatgacccatcgctc
aagtaccagatgttgatgctgatggacgaattcaccgccatggggcggatggacgtttgg
gccaagcggatttcgatctcggccagctacggggtgcgcgacctatgcatcatccagagc
aacgcccaactgcgctcggtctacggcgagcacgacgcccagaacttcacgaccaaccac
gccggcagcgcggtctacactccgcgcgaacagacagacgccaactcctatagcgagcag
ctggggttcaagaccatccgccgcaagcaccgctctcacggtagcggcgcgcaagggagc
agttacaacatcaactacacagaagaaaaacgggcactgatgctgccccaggaactcaag
gaactgcccaacgacgacgcgttgctcttcctcgaaggatgcaagccgatccgctgcaag
aagaactggtttttcaaggataccttcttcaagaagcgcatcctgccgccggtggagatt
acgccgatggtcgtgatacgtgatcagcggactggggcaggcaaggacgtccctttcgtg
gactga
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