Xanthomonas fragariae: BER92_12775
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Entry
BER92_12775 CDS
T04667
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xfr03009
]
BER92_12775
Enzymes [BR:
xfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
BER92_12775
Ribosome biogenesis [BR:
xfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BER92_12775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
AOD15444
UniProt:
A0A1Y6H7W3
LinkDB
All DBs
Position
complement(2807439..2807909)
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AA seq
156 aa
AA seq
DB search
MKCRLIAIGERAPAWVAQGFAEYQKRLSHWMPLELVEIEPGLRGKGRDAQRAIDEEGSRV
LAALPKNAHVVALDVPGRPLSSEQLAQRMEHWRGQGRDLAFLIGGPEGHAADVLKSASES
WSIGPLTLPHMVVRLIVAEQLYRAAAMLANHPYHRA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgccgactgatcgctatcggcgagcgcgcaccggcctgggtggcgcagggtttt
gccgaatatcaaaaacgtctctcgcactggatgccgctggagctggtcgaaatcgaaccc
ggcctgcgcggcaagggccgcgacgcgcaacgcgccatcgacgaggaaggcagccgcgta
ctcgcagcattgcccaagaacgcccatgtggttgcactcgatgtgccgggccgcccgctc
agttccgaacaacttgcccagcgcatggagcattggcggggccagggccgcgatctggca
ttcctgatcggtggcccggaaggccacgccgccgatgtgctgaaaagcgctagcgaaagc
tggtcgatcggcccgctcaccctgccgcatatggtggtgcgcttgatcgtcgccgagcag
ctgtatcgcgccgctgcgatgctggccaatcatccgtatcaccgcgcgtga
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