Xanthomonas fragariae: BER92_13135
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Entry
BER92_13135 CDS
T04667
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfr02000
]
BER92_13135
Transporters [BR:
xfr02000
]
Other transporters
Pores ion channels [TC:
1
]
BER92_13135
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AOD15495
UniProt:
A0A1Y6H9P3
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All DBs
Position
2874216..2876282
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AA seq
688 aa
AA seq
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MPHSLASSFRRSTLSLALTSLLTPALAMAEDAPADADPQTPPSSDTRHDATHSSSRHIKD
LDKVVVTASPLRDAAGELSRPVEVLAGERLDEVRSSSLGETVASLPGVQSSNFGPGVGRP
IIRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQIEVLKGPSTLLYGSGAIGGV
VNVVDGRIAERPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDY
DTPQGRQANSWIDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDLSIGERGVSLK
LQQDRYDLKGGLTDPWGEGSALRYSFGHTDYAHTEFEGEEVGTVFTKRANEGRVEASFTF
GGGWQTAFGLQGSDSTFQAVGEESFVPKTDARSLGVFGVVRNSWDRVTAEVGARVDKVKY
TTDIGVDRDFTPTSFSASGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAYEIG
DADLKTEKANQAELGLNFQNAWVDAKVAAYYNRYNDFVYIVDTGNQWFNEEDNGFLPIRQ
WTQADAIFHGFEGEATLHLADNDTGAWDLRVFGDTVRARLKDGGNLPRIAPGRLGAQMRW
NADQWRASLGATRTMRQDKVAVNETPTDGYTMVDAHLAYHVDRGSKAWEVFLDGNNLTNQ
DARVHTSFLKDDVMLPGRSASFGVRMFF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacagcctcgcttcctcgttccgccgctcaacgctctcgctggccctgaccagc
ctgctgacccccgccctggccatggccgaggacgcgccggcagatgccgatccgcagacc
ccgcccagctccgacacacgccatgacgccacccattccagcagccgccatatcaaggac
ctggacaaagtggtagtgaccgccagcccgctgcgcgatgcggcgggcgagttgagccgc
ccggtcgaagtgctggccggggagcggctggacgaggtgcgcagttctagcctgggcgaa
accgtggccagcctgccgggcgtgcagagttccaacttcggccccggcgtcggccggccg
atcatccgtggcctggacggcccgcgcgtagcagtgctgcgcgacggcctgtccacccag
gacgtctccacggtcagccaggatcactcgccggcgatcgagccttttcttgccaaccag
atcgaagtgctgaagggtccgtccacgctgctgtacggttccggcgcgatcggcggcgtg
gtcaacgtggtcgacggacgcatcgccgaaaggccggtggacggcttcagcggccgcgct
gaagtgcgcttcgacggcggcgacaaggacggcaacaccgacatgttccgcgtcgatgcc
ggcaacggcagcgggttgtcgatccatgccgacggcgtgtaccgcaaccagaacgattac
gacaccccgcaaggtcgtcaggccaactcctggatcgactccaaggtgggctcaatcggc
gcctcgctgtcgggcgactggggctttgtcggcctgtcggcctcgcgtttccgcgataac
tacggcaacccgggcgagccgggcgatctatcgatcggcgagcgcggggtgtcgctgaaa
ctgcagcaggaccgctacgacctcaagggcgggctgaccgatccgtggggcgaaggcagc
gcgttgcgttacagcttcggccacaccgattacgcgcacaccgagttcgaaggcgaagaa
gtcggcacggtgttcaccaagcgcgccaacgaaggccgcgtggaagcgtccttcaccttc
ggtggtggctggcagaccgcgtttggcctgcaaggtagcgacagcacgttccaggcagtc
ggcgaagaatccttcgtgcccaagaccgacgctcgctcgctcggcgtgttcggcgttgtg
cgcaacagctgggaccgcgtcactgccgaagtcggcgcacgcgtagacaaggtcaagtac
acaaccgacatcggtgtggatcgcgattttactccgaccagtttctcggccagtggcggt
tttcgcttcaacgaacaatggcgtttgaccgccaatctggatcacgccgagcgcgcacca
gctgaagaagagctgttcgccaacggcccgcatatcgccaccctcgcctacgaaatcggc
gatgcggatctgaagaccgaaaaggccaaccaggccgagttgggcttgaacttccagaac
gcatgggtggatgccaaggtggcggcgtactacaaccgctacaacgacttcgtctacatc
gtcgataccggcaaccagtggtttaacgaagaagacaacggcttcctgccgatccgccaa
tggacccaggccgatgcgatcttccacggtttcgaaggcgaagccacattgcatctggcc
gacaacgacaccggcgcgtgggatctgcgcgtgttcggcgacaccgtgcgcgcacgcttg
aaagatggcggcaacctgccgcgtatcgcgccgggccgtttgggtgcgcagatgcgttgg
aatgccgaccagtggcgcgcctcgctcggcgccacccgcaccatgcggcaggacaaggtg
gcagtgaacgaaaccccgaccgacggctacaccatggtcgatgcgcacctggcctaccac
gtggaccgcggcagcaaggcgtgggaagtgttcctggatggcaacaacctgaccaaccag
gacgcacgcgtgcacacctccttcctcaaggacgatgtgatgcttcccggccgcagcgcc
tcgttcggcgtgcgcatgttcttctga
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