Xanthomonas fragariae: BER92_13240
Help
Entry
BER92_13240 CDS
T04667
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
xfr
Xanthomonas fragariae
Pathway
xfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BER92_13240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_13240
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BER92_13240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AOD15507
UniProt:
A0A1Y6HKJ6
LinkDB
All DBs
Position
2903575..2906196
Genome browser
AA seq
873 aa
AA seq
DB search
MQTANTKHTTKLSTGAVEHTPLMKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAARLL
DITLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVAICEQIGDPALAKGLVERKVV
RIVTPGTVTDEALLDERRDTLLMAISRSKQGYGLAWADLAGGRFLVNEVDSVEALEGEIA
RLEPAELLVPDEDNWPEFLHGRSGVRRRPPWLFDADSGRRQLLAFFKLHDLSGFGIDDKP
GATAAAGALLGYVEETQKQRLPHLTAIAMEVASEAISMNAATRRHLELDTRVDGDTRNTL
LGVLDSTVTPMGGRLLRRWLHRPLRLHDVLVQRHHAVGTLIDAGADVDVREAFRALGDLE
RILTRVALRSARPRDFSTLRDGLALLPKVRAILAPLDSPRLQTLHAELGEHDATAHLLIG
AVADTPPLKLSDGGVIATGYDADLDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNR
VHGYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKSFEDKVLSARERALSREKLLYD
GLLDALGSELEGLKRCAAALSELDVLAGFAERAQALDWSQPELESAPCLRIERGRHPVVE
AVRDQPFEPNDLDLHTDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGP
IDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALAD
AVARHLAHTNRCYTLFATHYFELTALADESHAGGASGIANVHLDAVEHGERLVFMHAVKD
GPANRSFGLQVAALAGLPKAAVMQARRRLAELEQRGGESHSAQMAPAALDAPQQFGLFTA
PSSAAQEALQALDPDELTPKQALEALYRLKALL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaccgccaataccaaacacaccaccaagctcagcacgggcgccgtagagcacacc
ccgctgatgaagcaattttttgcagcaaagtcggactaccccgacctgctgctgttcttc
cgcatgggcgatttctacgagttgttctacgacgacgcgcgcaaggctgcgcggctgctc
gacatcaccctgacccagcgcggcagttccggtggcgcgccaatcccgatggccggcgtg
ccggtgcatgcgtatgaaggctacttggcgcgcttggtggcgttaggcgagtcggtggcg
atctgcgagcagatcggcgatccggcgctggccaagggcctggtcgaacgcaaggtggtg
cgcattgtcacgccaggtacagtcaccgatgaagcgctgctggatgagcgccgcgacaca
ctgttaatggcgatctcgcgcagcaagcagggctacggtctggcatgggcagatctggcc
ggcgggcgcttcctggtcaatgaagtggatagcgtggaggcgctggagggggaaattgcg
cgcctggaaccggcagagttgctggtgcccgacgaagacaactggccggaattcctgcac
ggacgtagcggcgtgcggcgtcggccaccgtggttgttcgacgccgatagtggtcgtcgt
cagctgttggcgttttttaaactgcacgacctgtccggcttcggcatcgacgacaagccg
ggggccacggcggcggccggcgcgctgctcggctatgtcgaagaaactcagaaacaacgc
ctgccgcatctgaccgcgatcgcgatggaagtggccagcgaggcgatctcgatgaatgcg
gccacacgccgccatttggagctggacacccgcgtcgatggcgatacccgcaacactttg
ctcggcgtattggacagcacggtcacgcccatgggcgggcgtctgctgcgacgctggttg
caccgtccgctgcgcctgcacgatgtgctggtgcagcgtcatcatgcggtcggcaccttg
atcgacgcgggcgccgatgtcgatgtgcgcgaggccttccgcgcgctcggcgatctggaa
cgcatcctcacccgcgtggcgctgcgctcggcgcggccacgcgatttttccaccttgcgc
gacggcctggcgctgttgccgaaggtgcgtgcgatcctggcaccgctggattcaccgcga
ttgcagaccctgcatgccgagcttggcgagcacgatgccaccgcgcatttgctgatcggc
gcggtggccgacacaccgccgctcaagctcagcgacggcggcgtcatcgccaccggttac
gacgccgatctggatgagctgcggcgcctgtccaccaacgcggaccagtttctgatcgat
ctggaacaacgcgaacgcgccagtagcggcatcgccacgctcaaggtcggctacaaccgc
gtgcacggctattacatcgagatcagcaagggccaagcggaaaaagccccgctgcactac
agccgccggcagacgctgaccaacgccgagcgctacatcaccgaagaactcaagagcttc
gaggacaaggtgctgtcggcacgcgagcgcgcgttgtcgcgcgaaaaactgctgtacgac
ggcctgctcgacgcactcggcagcgagctggaaggcctcaagcgctgcgccgctgcgctg
agcgaactggatgtgttggccgggtttgccgaacgcgcgcaggcgctggactggtcgcaa
ccggaactggagagcgcaccgtgcctgcgcatcgaacgcggccgacacccggtggtggaa
gcggtgcgcgatcagccgttcgagcccaacgatctggatctgcatacagatcgccggatg
ctggtcatcaccggcccgaacatgggcggtaaatcgacctacatgcgccagaacgccttg
atcgtgttgctggcgcatatcggcagctacgtgccggccagccgcgcggtgatcgggccg
attgaccgcatcctcacccgcatcggtgctggcgacgatctggcgcgcgggcaatccacc
ttcatggtggaaatggccgaaaccagctacatcctgcatcacgccacgccgcaatcgctg
gtgctgatggacgaaatcggccgcggcacctcgacctacgacggtctggcgctggccgat
gcggttgcacgccatctggcgcataccaatcgctgctacacgctgttcgccacgcattac
ttcgagctcactgcactggccgacgaatcgcacgccggcggcgccagcggcattgccaat
gtgcatttggatgcagtcgaacacggcgaacggctggtattcatgcatgcggtcaaggac
ggcccggccaatcgcagcttcggtctgcaggtagctgcgctggccggcttgcccaaggcg
gcggtgatgcaggcacggcgccgactggcggagctggaacaacgcggtggcgaaagtcac
agcgcccaaatggcacccgccgcactggatgcgccgcagcagttcggcttgttcaccgcg
ccatcttccgctgcgcaagaagcgttgcaggcgctggacccggacgagctcacgcccaaa
caggcgctggaggcgctgtaccggttgaaggcgttgctttaa
DBGET
integrated database retrieval system
