Xanthomonas fragariae: BER92_13945
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Entry
BER92_13945 CDS
T04667
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfr03000
]
BER92_13945
Transcription factors [BR:
xfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
BER92_13945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
ZapD
Mg_chelatase
HTH_23
AAA
HTH_17
HTH_28
HTH_30
AAA_2
ATPase
HTH_Tnp_ISL3
YdaS_toxin
HTH_Tnp_1_2
HTH_50
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AOD15617
UniProt:
A0A1Y6HRV8
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Position
3054514..3056115
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AA seq
533 aa
AA seq
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MRSPPLADSTDTSPPVIWTVSVSRLTGLLADVIPEFDKRARIEQINLGFAEAVEVIGQRL
RRERCDVLVAGGSNAAYLRSRLALPLAPIRATGFDLMEALARARRIAPRIGVVTHAGDVP
SFRAFQTSFDLDIAHRRFVTAEDARDCIADLRVSGIQVIVGTGMSIDFAEQAGLPGVLLY
SADSVRHALEHAITLGTAPSIDRSTGGTTTRRVRRTDALFGEDAAIAHVRDLVQLYAPHP
STVLISGETGTGKELVALQLHAGSRRRGRFVAINCGAITESLLEAELFGYSDGAFTGARR
GGHIGLIEAAQDGTLFLDEIGELPMPLQTRLLRVLEEREVLRVGATVPIAVDVRVVAASL
QQLQDLVERGRFRRDLFYRLAALRIALPPLRNRPDEIAMLLTHYFQQLGNIASPLSAAAL
QRLQQHTWLGNVRELRNLVERLCIHWKAHPSDSLSLEQLERWAPELFDVHIGDSAAPFGH
DDMATSRLHLTAATVRAALDRTNGNRALAAKALGVSRTTLWRWMQAQAVASRT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccctcctcttgctgattcaacagacacctccccaccggtaatttggactgtc
agcgtctcgcgcctgaccggcctgctggccgatgtcatccccgagttcgacaagcgcgcg
cgtatcgagcagatcaatctcggctttgccgaagcggtcgaggtcatcggtcaacgcctg
cgccgtgagcgctgcgacgttctggtcgccggcggctccaatgctgcctatctgcgcagc
cggctcgcgttgccgttggcaccgatccgggccaccggattcgatctgatggaagcgctt
gcgcgcgcgcgccgcatcgcgccgcgtatcggcgtggtcacccacgccggcgatgtgcct
tcgttccgcgccttccagaccagcttcgatctggacatcgcacaccggcgcttcgtcacc
gccgaagatgcgcgcgactgcatcgccgacctgcgcgtcagcggcatccaggtcatcgtc
ggcaccggcatgtcgatcgacttcgccgagcaggccggcttgcccggcgtgctgttgtac
tcggccgattcggtacgtcacgcgctcgaacatgccatcacgctgggcaccgcgccgagc
atcgatcgctccaccggcggcaccaccacacgacgcgtacgccgcaccgatgcactgttt
ggcgaagacgccgcaattgcacacgtgcgcgacctggtgcagctgtacgccccacatccg
agcaccgtgttgatcagcggcgagaccggcaccggcaaggagctggttgcgctccaactg
catgccggcagccgtcggcgcggccgcttcgtcgcgatcaattgcggcgccatcaccgaa
tcgctgctggaagcggaactgtttggctacagcgacggcgcattcaccggcgcacgccgc
ggcggccatatcggcctgatagaggcagcacaggacggcacgctattcctcgacgaaatc
ggcgagttaccaatgccgctgcaaacccgattgctgcgcgtcctggaagagcgcgaagta
ctgcgcgtgggcgccacagtgcccatcgccgtcgacgtccgcgtggtcgccgccagcctg
caacagttgcaggatttggtcgaacgaggccgcttccgccgcgatctgttctaccgcctg
gcagcattacgcatcgcactgccgccgctgcgcaatcgccccgacgaaattgcaatgttg
ctgacgcattacttccagcaactcggcaacattgcctcgccgttgtctgctgcggcattg
cagcgactgcaacagcacacctggctaggcaacgtgcgcgagctccgcaacctggtcgaa
cgtctatgcattcactggaaggcacatccaagcgacagcctgagcctggagcaactcgaa
cgctgggcgccggaattattcgacgtacatatcggcgatagcgcagcgccgttcggccac
gacgatatggcaacctcacgcctgcacctaaccgcagcaacagtccgcgcagcgctcgat
cgcaccaatggcaatcgtgcgctcgccgcaaaagcgctaggcgtttcgcgcaccaccttg
tggcgctggatgcaggcgcaggccgtggcatcacgtacttag
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