Xanthomonas fragariae: BER92_13980
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Entry
BER92_13980 CDS
T04667
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr03030
DNA replication
xfr03430
Mismatch repair
xfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BER92_13980
03430 Mismatch repair
BER92_13980
03440 Homologous recombination
BER92_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfr03032
]
BER92_13980
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_13980
Enzymes [BR:
xfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BER92_13980
DNA replication proteins [BR:
xfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BER92_13980
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BER92_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_22
TIP49
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AOD15620
UniProt:
A0A1Y6HLD5
LinkDB
All DBs
Position
complement(3059367..3060326)
Genome browser
AA seq
319 aa
AA seq
DB search
MTSAFSSWQQRAYDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASSPDPALA
QRTRQLIAAGTHPDLQLISFIPNRTGDKLRTEIVIEQVREISQKLSLTPQYGIAQVVIVD
PADAINRSACNALLKTLEEPSPGRYLWLISAQPARLPATVRSRCQRLEFKLPPAHEALAW
LLSQGVSERVAREALDAARGHPGLAAQWLREDGLAVRRAVAQDLEQVTSGRAGAVDVAQR
WTNDGQADQRLRHAADLALAQASAGLTDPSRLHKLAIWFDAANRTRDLLRTTVRADLAVT
ELLLAWREGERPPRSRGTR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcgttttcgtcctggcagcagcgcgcttacgaccagaccgtggccgccctg
gacgcgggccgactcgggcacggcctgttgatttgcggaccggaaggcctgggcaaacgc
gcggtggcattggcgctggccgagcacgtgctggccagctcgccagacccggcgctcgcc
cagcgcacgcgccagctgatcgcggccggtacccacccggacctgcagctgatctcgttc
atccccaatcgcaccggcgacaagctgcgcaccgagatcgtgatcgagcaggtgcgcgag
atttcgcaaaagctctcgttgaccccgcaatacggcatcgcccaggtggtgatcgtcgac
ccggccgacgcgatcaatcgctccgcctgcaatgccttgctcaagacgctggaagagcct
tcgccgggtcgttacctgtggctgatcagcgcgcagccggcgcgtctgccggcgaccgtc
cgcagccgctgccagcggttggaattcaagttgccgcccgcgcacgaggcgctggcctgg
ttgctgtcgcaaggcgtcagcgagcgggttgcacgagaggcgctggacgccgcgcgcggt
catcccggtcttgctgcgcagtggctgcgcgaggatggcctggcggtgcgtcgggcggtg
gcgcaggacctggaacaggtcaccagcggccgcgccggggcggtggacgttgcgcagcgc
tggaccaacgatggccaggccgatcaacgcctgcgccatgccgccgatctggcgctggcg
caggcatcggccggcttgaccgatccatcgcggttgcacaagctggcgatctggttcgac
gccgccaatcgcacgcgcgatctgctgcgcaccaccgtccgcgccgatctggcagtgacg
gaattgttgctggcctggcgcgagggagagcgtccgccacgttctaggggaacccgatga
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