Xanthomonas fragariae: BER92_14085
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Entry
BER92_14085 CDS
T04667
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr03030
DNA replication
xfr03430
Mismatch repair
xfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BER92_14085
03430 Mismatch repair
BER92_14085
03440 Homologous recombination
BER92_14085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfr03032
]
BER92_14085
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_14085
Enzymes [BR:
xfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BER92_14085
DNA replication proteins [BR:
xfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BER92_14085
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BER92_14085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
ResIII
AAA_18
AAA_7
AAA_30
PIF1
Mg_chelatase
nSTAND3
TsaE
DUF3646
AAA_2
AAA_24
AAA_19
ABC_tran
SKI
Motif
Other DBs
NCBI-ProteinID:
AOD15637
UniProt:
A0A1Y6HL23
LinkDB
All DBs
Position
complement(3080265..3082295)
Genome browser
AA seq
676 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPGHVKFLLATTDPQKLPMTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRAM
LGTVDRTQVGAMLQSLADGDGVRLLQVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPS
VAFVGDSIDPTAFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AMPAGGSDDGRGTNAGGGTRSVAAGVQAAAPAAAVPKSVAKPAGMIDAAPASVASVASVP
APTLAAVAPAPVVVLPATEAASSCRPSAATVHSDDTPPWAVDDAPVRVQAVPVSDATTAL
APEAAMAPPAAVVPEAVVAPHAAGVALASVPAAEAVVATPFAAATSAATPSAPAPTADQS
VLLDDRHVADTEQWLDLVTRSGLNGPSRQLAANAAFVGHRAGVLRLALAPGFEYLNSERS
IANLAQALAPVLGNTPRIVIETGSAGVETLHERTNRQKDERQSAAETAFMNDPSVQQLIQ
QQGARVVPDSIRPYDE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcttgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtgggc
caggaacatgtggtccgtgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
tttctgttcaccggcacccgcggcgtgggcaaaactaccatcgcgcgcattttcgccaag
tcgctcaattgcgaacagggcaccagcgccgacccgtgcggtcaatgcccggcctgcctg
gacatcgatgccggccgctatatcgacctgctggagatcgacgccgcgtccaataccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcaatacatgccctcgcgcggcaagttc
aaggtctacctgatcgacgaagtgcacatgctgtcgaaggcggcgttcaacgcgctgctg
aaaacgttggaagagccacccgggcacgtaaagtttttgctcgccactaccgacccgcag
aagctgccgatgacggtgttgtcgcgctgcctgcaattcaacctcaagcgcctggacgag
gaccagattcagggccaaatgacccggattctggctgccgagcagatcgaatcggatccg
tcggcgatcgtgcagctgtccaaggcggcggacggttcgttgcgtgatggcttgtccttg
ctcgaccaggcgatcgcctatgccggcggtgcgctgcgcgaggatgtggtgcgcgccatg
ctcggtacggtcgatcgcacccaggttggcgcgatgctacagtcgctggctgatggcgat
ggcgtgcgcctgctgcaggtggtggccgcgctggccgaattctcgcccgactggagcggc
gtgctggaggctctggccgaggctttgcaccgcatccaggtgcagcagttggtgccgtcg
gtggcgtttgtcggcgatagcatcgacccgaccgcgtttgccgcgcagttgcggccagag
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgggatctgtatctggccccc
agcccgcgcgctggtttcgagatggcggtgctacgcatgttggccttccgtcctgctgcg
gcgatgccggctggtggcagtgatgatggacgcggcaccaatgccggtggcggtacacgt
tcggttgctgccggcgtgcaggcggcggcaccggcggcagcggtgcctaagtctgttgcg
aagccggccgggatgatcgatgcggcgcctgcttcggttgcgtcggttgcgtcggtgccc
gcacccacgctggccgccgtggcaccagcgcccgttgttgtgctgcctgcgacggaagca
gcgtccagttgtcgcccgtccgcagccaccgtgcacagcgacgatacgccgccgtgggcg
gtagacgacgcaccggtacgtgttcaggctgtgcccgtgtccgatgcgacaaccgcgctc
gctcccgaagctgcaatggcgccgccggctgcggttgtgcctgaggccgtagttgcacct
cacgcagccggcgttgctcttgcgtctgttccggctgctgaggctgtggtggctacgcca
tttgcagccgcaacatccgcagccacgccatctgcaccagcaccgacggccgatcagtct
gttttgctcgatgaccgtcacgtcgccgacaccgagcaatggctggatttggtgacgcgc
agcggtttgaatggtccgtcacgccagcttgccgccaatgccgccttcgttggtcatcgc
gctggtgtgttgcgtctggcgctggcgccgggcttcgaatatctgaattcagagcgctct
atcgccaacctcgcgcaggcgctggcgccggtgttgggaaacacgccgcgcatcgtcatt
gagaccggcagcgccggtgtcgagaccttgcatgagcgtaccaatcgccagaaagacgag
cgccagagcgcggcagaaacagccttcatgaacgacccgagcgtgcagcagctgatccag
cagcagggcgcgcgggtcgtccccgattccatccgcccttacgacgagtaa
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