Xanthomonas fragariae: BER92_14460
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Entry
BER92_14460 CDS
T04667
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BER92_14460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfr03400
]
BER92_14460
Enzymes [BR:
xfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BER92_14460
DNA repair and recombination proteins [BR:
xfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BER92_14460
RecFOR pathway proteins
BER92_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_16
AAA_22
TIP49
nSTAND3
AAA_14
Bac_DnaA
AAA_33
TsaE
AAA_2
NTPase_1
Rad17
RNA_helicase
AAA_18
TniB
DUF815
NB-ARC
AAA_17
AAA_28
AAA_24
Sigma54_activ_2
ABC_tran
ATPase_2
bpMoxR
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AOD15689
UniProt:
A0A1Y6HM57
LinkDB
All DBs
Position
complement(3153483..3154520)
Genome browser
AA seq
345 aa
AA seq
DB search
MDRIIASSSTREDDAADASIRPQRLADYLGQQPVREQMEIYIQAAKARGEAMDHVLIFGP
PGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVE
EVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRLEF
YSPQELTRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDYAQVKAAGQID
LPVAQAAMQMLKVDPEGFDELDRRMLRVIVDHFDGGPVGVESLAASLSEERGTLEDVIEP
YLIQQGFLIRTARGRMATNKAYRHLGLKPKAAPVPDLFAEDEDVG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcattatcgccagcagttccacccgcgaagacgatgccgccgatgcgagcatc
cgtccccagcgcttggccgactatctcggtcagcagccggtgcgcgagcagatggagatc
tatatccaggcggccaaggcgcgcggcgaggcgatggatcatgtgctgatctttggtccg
cccggtctgggcaagaccacgctcagccatgtcatcgccaatgagctcggggttagcttg
cgggtgacttccggcccggtaatcgaaaaggccggcgatctggctgcgctgctgaccaat
ctgcagccgcacgatgtgctgtttatcgacgagatccatcgcctctccccagtagtcgaa
gaagtgctgtatccggcgatggaagatttccagatcgacatcatgatcggtgacggccct
gccgcgcgctcgatcaaaatcgacctgccgccgttcacgctgatcggcgccaccacgcgt
gccggcctgctgaccgcgccgttgcgcgaccgcttcggcatcgtgcagcgtctggaattt
tattcgccgcaggaattgacccggatcgtgatccgctcggctgcgatcctgggtatcgac
tgcacacccgatggtgctgccgagatcgcgcggcgcgcccggggcacgccgcgtattgcc
aaccggctgttgcggcgcgtgcgcgactacgcccaggtcaaggcggccgggcagatcgat
ctgccggtggcgcaggcggcgatgcagatgctgaaggtcgatccggaaggcttcgacgag
ctcgaccgccgtatgttgcgcgtcatcgtcgatcacttcgatggcgggccggtgggtgtg
gagtcgttggctgcctcgttgtcggaagaacgcggcacgctggaagacgtgatcgaaccc
tacctgatccagcagggctttttgatccgcactgcgcgcgggcgcatggccaccaataag
gcttaccgccacctcgggctcaagcccaaggccgcaccggtaccggacctgtttgcggag
gacgaagatgtcggttga
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integrated database retrieval system