KEGG   Xanthomonas fragariae: BER92_14460
Entry
BER92_14460       CDS       T04667                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
xfr  Xanthomonas fragariae
Pathway
xfr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BER92_14460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfr03400]
    BER92_14460
Enzymes [BR:xfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BER92_14460
DNA repair and recombination proteins [BR:xfr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BER92_14460
    RecFOR pathway proteins
     BER92_14460
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 Mg_chelatase AAA_16 AAA_22 TIP49 nSTAND3 AAA_14 Bac_DnaA AAA_33 TsaE AAA_2 NTPase_1 Rad17 RNA_helicase AAA_18 TniB DUF815 NB-ARC AAA_17 AAA_28 AAA_24 Sigma54_activ_2 ABC_tran ATPase_2 bpMoxR NPHP3_N
Other DBs
NCBI-ProteinID: AOD15689
UniProt: A0A1Y6HM57
LinkDB
Position
complement(3153483..3154520)
AA seq 345 aa
MDRIIASSSTREDDAADASIRPQRLADYLGQQPVREQMEIYIQAAKARGEAMDHVLIFGP
PGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVE
EVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRLEF
YSPQELTRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDYAQVKAAGQID
LPVAQAAMQMLKVDPEGFDELDRRMLRVIVDHFDGGPVGVESLAASLSEERGTLEDVIEP
YLIQQGFLIRTARGRMATNKAYRHLGLKPKAAPVPDLFAEDEDVG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggatcgcattatcgccagcagttccacccgcgaagacgatgccgccgatgcgagcatc
cgtccccagcgcttggccgactatctcggtcagcagccggtgcgcgagcagatggagatc
tatatccaggcggccaaggcgcgcggcgaggcgatggatcatgtgctgatctttggtccg
cccggtctgggcaagaccacgctcagccatgtcatcgccaatgagctcggggttagcttg
cgggtgacttccggcccggtaatcgaaaaggccggcgatctggctgcgctgctgaccaat
ctgcagccgcacgatgtgctgtttatcgacgagatccatcgcctctccccagtagtcgaa
gaagtgctgtatccggcgatggaagatttccagatcgacatcatgatcggtgacggccct
gccgcgcgctcgatcaaaatcgacctgccgccgttcacgctgatcggcgccaccacgcgt
gccggcctgctgaccgcgccgttgcgcgaccgcttcggcatcgtgcagcgtctggaattt
tattcgccgcaggaattgacccggatcgtgatccgctcggctgcgatcctgggtatcgac
tgcacacccgatggtgctgccgagatcgcgcggcgcgcccggggcacgccgcgtattgcc
aaccggctgttgcggcgcgtgcgcgactacgcccaggtcaaggcggccgggcagatcgat
ctgccggtggcgcaggcggcgatgcagatgctgaaggtcgatccggaaggcttcgacgag
ctcgaccgccgtatgttgcgcgtcatcgtcgatcacttcgatggcgggccggtgggtgtg
gagtcgttggctgcctcgttgtcggaagaacgcggcacgctggaagacgtgatcgaaccc
tacctgatccagcagggctttttgatccgcactgcgcgcgggcgcatggccaccaataag
gcttaccgccacctcgggctcaagcccaaggccgcaccggtaccggacctgtttgcggag
gacgaagatgtcggttga

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