KEGG   Xanthomonas fragariae: BER92_15060
Entry
BER92_15060       CDS       T04667                                 
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
xfr  Xanthomonas fragariae
Pathway
xfr00260  Glycine, serine and threonine metabolism
xfr00630  Glyoxylate and dicarboxylate metabolism
xfr00670  One carbon pool by folate
xfr00785  Lipoic acid metabolism
xfr01100  Metabolic pathways
xfr01110  Biosynthesis of secondary metabolites
xfr01200  Carbon metabolism
Module
xfr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BER92_15060
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BER92_15060
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BER92_15060
   00670 One carbon pool by folate
    BER92_15060
Enzymes [BR:xfr01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     BER92_15060
SSDB
Motif
Pfam: GDC-P GcvP2_C Aminotran_5 Phage_cement_2
Other DBs
NCBI-ProteinID: AOD15782
UniProt: A0A1Y6HSF4
LinkDB
Position
3283781..3286696
AA seq 971 aa
MSQTSSSLRDLEHHNAFVERHIGPSDAEIAQMLSVVGHASLDALTDAIVPGNIKSPATLA
LPDAITEEAALAKIAAIASKNQVQRTFIGQGYYGTHTPKVILRNILENPAWYTAYTPYQA
EISQGRMEALINFQTLCADLTGMQIANASLLDEATAAAEAMTLAKRSARSKSETFFVHDA
VHPQTLELLRTRSEPLGIVLRVGTPEEALQAECFGVLLQYPDSFGNIGDHAALADTVHAQ
GGLVAVATDLLALTLIAAPGEWGADIVVGNAQRFGVPFGFGGPHAAFMACRDAYKRSMPG
RLIGVSIDAAGNPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPDGLTR
IARRTHRLAAILAAALRHAGVKVGEHFFDTLHVKAIDAEAIHAKARAAGINLRAIDSEAV
GISLDETTTRADVVALAALFGVQLDDAQAGASVAGGRMPGVTIDALDAATTDALPQGLLR
TSAFLRHPVFNTHHSEHELLRYMRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPE
FGAIHPLAPAEQSAGYAQLIDELEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRS
RGQARRDICLIPESAHGTNPASAQMCGMTVVVTKCDANGNVDVEDIRAKAEKYSERLAAL
MITYPSTHGVFEEDVVAICEAVHAHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKT
FCIPHGGGGPGVGPCAVKSHLAPFLPRTLGSEGDVGMVSAASYGSASILPISWMYVTMMG
SAGLRKATQVALLNANYIAKHLAPHYKTLYTGRNGLVAHECILDIRPLEKTSGIGAEDIA
KRLIDFGFHAPTLSFPVAGTLMVEPTESESQHELDRFIDAMIQVREEIRAIEDGRLDRQD
NPLKHAPHTATQVSANEWPHAYPRELAAFPLLSLKQHKYWPPVARVDNVYGDKNVMCTCI
PVDAYKGDVEA
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgtcccagacttcctcttccctgcgcgacctcgaacaccacaacgcgttcgtcgaacgc
catatcggcccaagcgacgcggaaatcgcgcagatgctgagcgtggtcggccacgcctca
ttggatgcgctgaccgacgccatcgtgcccggcaacatcaagtcgccggctacgctggcg
ttgcccgacgcgatcaccgaagaagcggcgctggccaagattgccgccatcgccagcaag
aaccaggtgcagcggacgtttatcggccagggctattacggcacccatacgccgaaggtg
atcctgcgcaacattctggaaaacccggcctggtacaccgcctacacgccataccaggca
gaaatttcgcagggccgcatggaagcgctgatcaacttccagaccttgtgcgccgacctg
accggcatgcagatcgccaacgcctcgttgctggacgaagccaccgccgcggccgaagcg
atgacgctggccaagcgttcggccaggtcgaagtccgagacgttcttcgtgcacgacgcg
gtgcatccgcagacgctggaactgctgcgcacccgcagcgagccgctgggcatcgtgctg
cgcgtgggcacgccggaagaagcgttgcaggctgagtgctttggcgtgctgctgcagtat
cccgatagcttcggaaacatcggcgaccacgccgcacttgccgatacggtgcatgcgcaa
ggcggcctggtcgcggtggccaccgatctgctcgcactgaccctgatcgctgcacctgga
gaatggggcgcagatatcgtggtcggcaatgcgcagcgctttggcgtgccgttcggtttc
ggcggtccgcatgcggccttcatggcctgccgcgatgcctacaagcgctcgatgccgggc
cgtctgatcggcgtgtcgatcgatgccgccggcaatccggcctatcgcctcaccttgcaa
acgcgcgaacaacatatccgccgcgaaaaggcgacctccaacatctgtacagcgcaggtg
ctgctggcggtaatggcctcgatgtatgcggtctaccacggccccgacggcctgacccgc
atcgcgcgacgcacgcatcgtctggccgcgattttggccgccgcactgcgtcatgccggt
gtcaaggtgggcgagcatttcttcgacacgctgcatgtcaaggcgatcgatgccgaggcg
attcacgccaaggcgcgtgccgccggcatcaacctgcgtgcaatcgacagcgaagcggtc
ggcatcagcctggatgaaaccaccacccgcgccgatgtggttgcgctggctgcattgttc
ggcgtgcagctggacgatgcacaagcaggtgcgagtgtcgcgggaggcaggatgccggga
gtgaccatcgatgcgctcgacgccgccaccaccgatgccttgccgcaaggtctgctgcgc
accagcgcgttcctgaggcacccggtgttcaatacccaccacagcgagcacgaactgctg
cgctatatgcgctcgctggccgacaaggatctggcgatggatcgcaccatgatcccgctc
ggcagctgcaccatgaagctcaatgccaccgccgaaatgatcccggtcacctggcccgag
ttcggcgcgatccatccgctggcaccggccgaacagtcggccggctacgcgcagttgatc
gacgaactggaagcgatgctggtcgagtgcaccggctacgatgcggtgagcctgcaaccc
aattccggcgcgcagggcgaatatgccggcttgctggcgattcgcgcctatcaccgctcg
cggggccaagcgcgccgcgatatctgcctgattcccgaatccgcgcacggcaccaacccg
gcctccgcgcagatgtgcggcatgaccgtagtggtcaccaagtgcgatgccaacggcaac
gtcgatgtcgaagacattcgcgccaaggcagaaaaatattccgagcgtctggctgcgctg
atgatcacctacccgtccacgcatggcgtgtttgaagaagacgtggtggcgatctgcgaa
gccgtgcatgcgcatggcggccaggtctacaccgacggcgccaacatgaacgcactggtc
ggcgtggccaagcccggcaagtggggctcggacgtgtcgcatctcaatctgcacaagacc
ttctgcattccgcatggcggcggtggcccaggagtggggccatgtgcggtgaagtcgcat
ctggcgcccttccttcccagaactttggggagcgaaggcgacgtcggcatggtaagcgca
gccagctatggctcggcctcgatcctgccaatcagctggatgtacgtgaccatgatgggc
agcgccgggctgcgcaaggcgacccaggtagcgctgctcaacgctaactacatcgccaag
catctagcgccgcattacaagacgctatacaccggccgtaatggcttggtagcgcacgag
tgcatcctcgatatccgcccgctggaaaagaccagcggcatcggtgccgaggatatcgcc
aagcgtttgatcgacttcggcttccacgcgccgacgttgagcttcccggtggccggcacg
ctgatggtcgaaccgaccgaaagcgaatcgcagcacgaactggaccgcttcatcgacgcg
atgatccaggtccgcgaagaaatccgcgcgatcgaagacggccgcctggaccgccaagac
aacccgctcaagcacgcaccgcacaccgcaacgcaagtgtcggccaatgagtggccccac
gcctacccgcgcgaactggctgccttcccgctgctcagcctcaagcagcacaagtactgg
ccgccggtggcacgcgtggacaacgtctacggcgacaagaacgtgatgtgcacctgtatc
ccggtcgatgcgtataagggcgacgtagaggcgtaa

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