Xanthomonas fragariae: BER92_17255
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Entry
BER92_17255 CDS
T04667
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfr02000
]
BER92_17255
Transporters [BR:
xfr02000
]
Other transporters
Pores ion channels [TC:
1
]
BER92_17255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AOD16114
UniProt:
A0A1Y6H5E7
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All DBs
Position
complement(3767073..3769217)
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AA seq
714 aa
AA seq
DB search
MFVLTPRRRMAHTLPLLSVLTCAGIGPFADAAEPQARDLDAVQVRSQYTPYRALSVTGAT
KTDTPLRDLPISARVLDQTLLDDAGVTDLAGALEMASGITKANNLGGLWDSYSIRGFTGD
PNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGAVNIVTKKPLFQ
PQHSVDLSAGRFDSYRAAVDSTGPLGKNVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLW
MPTPDTTVSYELELVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQVFV
VHGLNQTWSLQGGATYRDSGMRGFSTEPWTLQADDRTLRREHRYRNYQGRDIATRAELLG
TLQAGSVTHDVLFGIDGNRFDDSRFQQRARSAAAPYSIDVLAPQYGVAQPGRLATITDTD
ERQQVWGVYAQDQIGLGTRWKALLGLRYDHYQQDLNDQLRGATQRASDGVVSPRAGLIFH
VDDALSVYASAAAGFRPNSGVGADGQSFAPEKSRSLETGLKYVRPGDGVEATLAAYRIDK
KNVLSLDPADTSFSLPVGEMRSQGVELDLLGRLTPRLAASVGLAFTDSQVIRSNAAAAST
GLAEGRRFPNVPRFSGNAFVNYEQPLTGKRSAAVGVGVSHTGERLGSVDSNTDFVLPAYT
VWRLVGHYDLSERLRLYARIENLTDRRYAAFSYSEQWVYPGAPRSWTVGVRLRF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgttaacgccacgccgccgtatggcgcacacactgcccttgctcagtgtgctg
acctgcgccggcatcggtccatttgccgacgccgccgagccgcaggcgcgcgatctggat
gcggtgcaggtgcgcagccagtacacgccgtatcgcgcgttgagcgtcaccggcgccacc
aagactgatacaccgttgcgcgatctgccgatcagtgcgcgtgtgctcgatcagaccttg
ctggacgatgcaggtgtcaccgatctggccggcgcgctggagatggccagcggcatcacc
aaggccaataacctgggcggcttgtgggacagttactcgatacgcggcttcaccggcgac
ccgaatttcagttcggattacatggtcaacggcttcaacgccagccgcgggtacaacggc
ctgcgcgatgcggccaacacgcaaagcatcgaggtgatcaaaggcccggcctctgcgttg
tacggccgcggcgagccgggcggggcggtcaatatcgtgaccaagaagccgttgttccag
cctcagcacagcgtggatctgtcggctggtcgcttcgacagttatcgcgcggcggtggac
agcaccggcccgctgggcaagaacgtggcctatcgcttgaacgtgatgcacaaggatcag
cacagcttccgtgacaccgtagacagcgacaacaccctgttggcgccgtcattgctatgg
atgccgacgcccgatactacggtgtcgtatgagctggaattggtgcgcatccacgcgccg
ttcgatcgtggcgtgactgccatcgatggcgatgccaatcgtctgccggcatcgcgtttt
ctgggcgaaccgcgcgatggcgatatcgatctgcattccaccggccatcaggtatttgtg
gtgcatggtttgaatcagacctggtcgctgcagggtggcgcaacctatcgcgacagcggc
atgcggggattttcgactgaaccgtggacgctgcaggccgacgaccgcacgctgcggcgc
gagcaccgctaccgcaattatcagggccgcgatatcgctacgcgtgccgaattgctcggc
accttgcaagcgggcagcgtcacccacgacgtgttgttcggcatcgacggcaatcgcttc
gacgacagccgttttcagcagcgcgcccgctcggcggccgcgccgtacagcatcgacgtg
ctcgcaccgcagtacggcgttgcccagcccggccggctggcgacgatcaccgataccgat
gagcgccagcaggtgtggggcgtgtatgcgcaggatcagatcggtctgggtacgcgctgg
aaagccttgcttggtctgcgctacgaccattaccagcaggatctgaacgaccagttgcgc
ggcgccacgcagcgcgcttccgatggcgtggtcagcccacgtgcggggctgatctttcat
gtcgacgatgccttgtcggtgtatgcgagcgcggcggcgggttttcgtcccaacagcggt
gtgggcgcggatgggcagagcttcgcacccgagaaaagccgctcgctggagaccgggttg
aaatacgtacgacccggcgatggtgtggaagcgaccttggccgcgtaccgtatcgacaag
aagaatgtgctgagcctggatccggccgacaccagtttctcgttgccggtgggcgaaatg
cgcagtcagggcgtggagctggatctgctcggtcgcttgaccccgcgcttggccgcatcg
gtgggcctggcctttaccgattcgcaagtaatacgcagcaacgccgctgccgccagcacc
ggtttggccgagggcagacgctttccgaatgtgccgcgcttcagcggcaacgccttcgtc
aactacgagcagccgctgaccggcaagcgcagtgctgccgtcggtgtgggtgtgtcgcat
accggcgaacggctggggtcggtggatagcaataccgatttcgtgctgccggcctatacc
gtctggcggctggtgggccattacgatctgagcgagcgcctgcgcctgtatgccaggatc
gagaaccttaccgaccgccgctacgccgcgttctcttacagcgagcaatgggtgtatccc
ggcgcgccgcgcagctggacggtgggtgtgcggttgcggttttga
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