Xanthomonas fragariae: BER92_19310
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Entry
BER92_19310 CDS
T04667
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
xfr
Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfr03016
]
BER92_19310
Transfer RNA biogenesis [BR:
xfr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BER92_19310
Prokaryotic type
Methyltransferases
BER92_19310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
MCM
AAA_28
AAA_16
Ras
AIG1
ABC_tran
GTP_EFTU
AAA
Roc
Motif
Other DBs
NCBI-ProteinID:
AOD16415
LinkDB
All DBs
Position
complement(4228393..4229733)
Genome browser
AA seq
446 aa
AA seq
DB search
MSSSPSTIVAIASAAGSGGIGIVRLSGPQAAQIAANLGITNLQPRQARYARFRDADDEVI
DDGIALWFPAPRSFTGEDVVELQGHGSPVLLQQLVARCIALGARQARAGEFSERAFLNGK
LDLAQAEAIADLIAAGDVRAARAARRSLDGVFSRRVNTVSDSLTRLRIHVEAAIDFADES
LDTLGGVQVRDGLSKARGLLAQLLCDAERGRKLRDGLHAVLIGPPNVGKSSLLNALAGSD
RAIVTDVAGTTRDTLHEAIQLDGFELTLVDTAGLRDGGDAIEREGMRRARAELQRADLAL
VVLDARDPQAARDAIGDAIDAVPRQLWIHNKCDLLTEAVELDHDAIAVSAVTGQGLERLH
MRLRDLALGDGVESVGGEFSARTRHVEALRRAEQHADAADLELGFEQLELAAEELRLAHE
ALGDITGKLSADGLLGKIFSSFCIGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcgccatcgaccatcgttgccatcgccagtgccgccggaagcggaggcatc
ggcatcgtgcggctatccggcccgcaggccgcgcagattgccgcgaacctgggcattacg
aatttgcagccacggcaggcgcgctacgcacgttttcgcgatgcggatgacgaggtgatc
gacgatggcattgcgctgtggtttccggcgccgcgtagttttaccggcgaagacgtggtg
gagctgcaaggccacggcagcccggtattgctacagcaattagtggcgcgctgcattgcc
ttgggcgcgcgtcaagcacgtgccggtgagttcagcgagcgcgcatttctcaacggaaaa
ctcgatcttgcgcaggcagaggccatcgccgacctgatcgccgccggggatgtgcgtgcg
gcacgtgccgcgcgtcgttcgctcgatggcgtgttctcgcgccgcgtcaatacggtcagc
gacagcctcacgcgtttgcggatccatgtggaggcggccatcgatttcgccgatgaatcg
ctggacaccctggggggcgtgcaagtgcgcgacggcttgagcaaggcgcgcggcctgctc
gcacagttattgtgcgatgccgaacgcggtcgcaagttgcgcgacggtttacatgcggtg
ttgatcggaccgcccaatgtcggcaaaagttcgttgctcaatgcattggctggtagcgat
cgcgcgatcgtcaccgatgtcgctgggaccacacgcgacaccttgcacgaagccatccag
ctcgatggcttcgagttgacgttggtcgacaccgccggcttgcgcgatggcggcgatgcg
atcgaacgcgaaggcatgcgccgcgcacgtgccgaattgcagcgcgccgatctggcgcta
gtggtgctggacgcacgcgacccgcaagccgcacgtgacgcgattggtgatgccatcgat
gcggtgccgcgtcagctatggatccacaacaagtgcgatctgctgaccgaggccgtggag
ctcgaccacgatgcgatcgcggtttctgcagtgaccggtcagggactggagcgattgcac
atgcgcctacgcgatctcgcgctgggcgatggtgtagaaagtgtcggcggcgagttctcc
gcacgcacacggcatgtcgaagcattgcgtcgcgccgaacaacatgcagatgctgccgat
ctggagctagggttcgagcagctggaactggccgccgaggaactgcgtctggcacatgaa
gcacttggcgatatcaccggcaagctgagcgccgacgggttgctcggcaagatcttttcg
agtttttgtattggtaagtga
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