Xylella fastidiosa subsp. sandyi Ann-1: D934_01785
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Entry
D934_01785 CDS
T03318
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
xfs
Xylella fastidiosa subsp. sandyi Ann-1
Pathway
xfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D934_01785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfs03019
]
D934_01785
Enzymes [BR:
xfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D934_01785
Messenger RNA biogenesis [BR:
xfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D934_01785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
P-loop_SecA
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AIC10987
UniProt:
A0A060HDJ4
LinkDB
All DBs
Position
400769..402109
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AA seq
446 aa
AA seq
DB search
MNFETLGLLPSLLRALSEQGYEIPTPIQQQAIPLALAGHDLLAAAQTGTGKTAAFGLPVL
QRLMAASSNVGAGKPRALVLTPTRELATQVHDSLRGYAKYQRVSSAVIYGGVGMGNQLDV
LRRGVDLLIACPGRLIDHIERRSVDLSGVGILVLDEADRMLDMGFLPSIKRILGKLPRQN
RQTLLFSATFAEPIKQLALEFMCRPREVMVASHNTVAETITHRVHPVDVSRKRELLLYLL
AQDSREQTLVFVRTKHGSDKLATFLEKYGIKTAAIHGNKTQGQRLRALNSFKAGRVTVLV
ATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGVQGEAISLVTQEDAKLLRQI
VRLLDRDMDIRDVPDFEPQVPIRWGNSAPGKSKQPAGQHPPRKSQHRRAFGKASVHTTPA
LKKQSGVQHSNGSRNRDGMFPVHQRG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgaaactttgggattgttgccttccttacttcgtgctcttagcgagcaaggt
tacgaaataccgaccccaattcagcagcaggcgattccattggcattagctggccacgat
ttgcttgctgccgcgcaaacagggacaggtaagacggctgcgttcggcttgcctgtattg
caacgattgatggccgcttcatctaatgttggtgccggtaagccgcgtgctttggtgctg
acaccgacccgtgagctggcgactcaggtccacgacagcctacgtggttacgccaagtat
caacgtgtatcaagtgcggtgatttatggtggtgtggggatggggaatcagttggatgtg
ctgcgccgtggcgtagatttgttgattgcctgcccgggtcgtttgattgatcatattgaa
cgtcgcagtgtggatttgtcaggcgtcgggattttggtattagatgaggctgatcgcatg
cttgacatgggtttcctcccctcaattaaacgtatcctcggcaaactaccgcggcagaat
cgccaaactctgctgttctctgcgacatttgctgagccgattaaacagttggcgttagag
tttatgtgccgcccacgcgaggtgatggtggcgtcgcataacaccgttgctgagaccatt
acgcatcgtgtgcatcctgtcgatgttagccgcaagcgtgaattgttgttgtatctgttg
gctcaagatagcagggagcagacactggtgttcgtgcggaccaagcatggcagtgacaag
cttgctacgttcttggagaaatacggaatcaagacagcagcgattcacggtaataagact
cagggccagcgtctgcgtgcattaaacagtttcaaagcagggcgagttaccgtgctggtg
gccactgacattgctgcgcgcggaattgatattgaccaattgccaaaggtgatcaattac
gatttgcctatggtggctgaggattatgtgcatcgcatcgggcgtactggacgcaatggt
gtgcagggagaggcaatttcattagtcactcaggaggacgctaagttattgcgtcagatc
gtgcgtttgcttgatcgtgatatggatattcgcgatgtaccggatttcgaacctcaagtc
ccgatccgttggggtaacagtgctccgggaaagagtaagcagcctgctggacagcaccca
ccacgtaagagtcaacatcggcgagcattcggcaaagcatctgtgcatacgacgcctgct
ttaaaaaaacaatcaggtgtacaacatagcaatgggtcccgtaatcgtgatggaatgttc
ccggttcatcagcgtggttga
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