Xylella fastidiosa subsp. sandyi Ann-1: D934_01980
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Entry
D934_01980 CDS
T03318
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xfs
Xylella fastidiosa subsp. sandyi Ann-1
Brite
KEGG Orthology (KO) [BR:
xfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfs03016
]
D934_01980 (truB)
Enzymes [BR:
xfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D934_01980 (truB)
Transfer RNA biogenesis [BR:
xfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D934_01980 (truB)
Prokaryotic type
D934_01980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIC09355
UniProt:
A0A060H230
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All DBs
Position
447840..448742
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AA seq
300 aa
AA seq
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MSRISYRRLDGILLLDKPAGISSNSALQVARRLLRAKKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLDSTKAYDADVLLGTTTTTDDAEGAVLLTRPVPTLDAEMVDALIPQLIGRIRQ
RAPIYSALKQGGEPLYAKARRGEVVNAPVREVEVHAIELLVLATPRLQLRVTCGSGTYIR
SLVRDLGEILGCGAHITALRRRWVAPFQIPKMLTLDALEQALSAGRDPDSLLLPLVEGLA
GFPALDLDAQRLACFRLGQRLRDHSFQTGRVAVFSRDGIPAGLGEVDSEGLLVPQRLFNL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcatttcctatcgtcgtttggatggtattttgctgcttgataagccagctggc
ataagttctaacagtgcgttacaggtcgcgcgtcggttattgcgtgctaaaaaggggggg
catactggtagcttggatccactcgctactggattgttgccgctgtgttttggagaagcc
accaaaatcgctggtttgctactggattctaccaaggcatacgacgctgacgtgctactc
ggcaccacgacgacgacggatgatgctgaaggggctgtattacttacgcgccctgtgccg
acgttagatgccgaaatggttgatgctcttatacctcaattgattggtcggattaggcaa
cgtgccccaatctattctgctctcaaacagggcggtgaacctttatatgctaaagctcgg
cgtggtgaagtggtcaatgccccggtacgtgaggttgaggtgcatgcgatcgaattgctt
gttttggctacgccgcgattacaattacgtgtgacttgcggttcgggtacatatattcgt
agcctagttcgcgatttgggcgaaatcttgggctgcggcgcacatatcactgcattgcgc
cgtcgttgggtcgctccatttcagataccgaagatgttgacgttggatgcattggagcag
gcattgagtgcagggagagatcctgattctctgttattgccattggttgaaggattagcc
ggtttcccagcgctggacctcgatgcccagcgtctagcttgcttcaggctagggcagcgc
ttgcgcgatcatagtttccagactgggcgggttgcggtgttcagtcgagatggtatccct
gcggggctgggggaggtggatagtgaaggcttgttggtgccgcagcgtcttttcaatctt
tga
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