Xylella fastidiosa subsp. sandyi Ann-1: D934_03090
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Entry
D934_03090 CDS
T03318
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xfs
Xylella fastidiosa subsp. sandyi Ann-1
Pathway
xfs03030
DNA replication
xfs03410
Base excision repair
xfs03420
Nucleotide excision repair
xfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D934_03090
03410 Base excision repair
D934_03090
03420 Nucleotide excision repair
D934_03090
03440 Homologous recombination
D934_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfs03032
]
D934_03090
03400 DNA repair and recombination proteins [BR:
xfs03400
]
D934_03090
Enzymes [BR:
xfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D934_03090
DNA replication proteins [BR:
xfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D934_03090
DNA repair and recombination proteins [BR:
xfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D934_03090
NER (nucleotide excision repair)
GGR (global genome repair) factors
D934_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AIC09522
UniProt:
A0A060H9C1
LinkDB
All DBs
Position
681879..684650
Genome browser
AA seq
923 aa
AA seq
DB search
MSKLVLIDGSSYLYRAFHALPPLSNAAGEPTGALFGVVNMLRTTLKERPDYAAFVIDAPG
KTFRDALDCEYKMHRPPMPDDLRMQVEPMCGIVHALGIDILCIDGVEADDVIGTLALAAV
ADGIAVTISTGDKDFAQLVRPGVELVNTMTGSRMDSAMAVINKFGVAPDQIIDFLALMGD
SVDNVPGVDKCGPKTAAKWLAEYGSLDAVIANADKIKGKIGDNLRIVLPRLLLNRALITI
KTDVVLEKRPQDLALRERDTEALRDFYRRYGFTQALKELDGGSVAVTVAEQEPGRRRNAG
FHVAPDASVAMEINPALSAPGEYETIFTVEQLQDWIVRLRVAGQFALDTETDSLDPMQAV
LIGLSFASEVGCAAYLPFGHDYPGAPVQLDRGQALALLQPLLEDPAVRKVGQHGKYDMHV
LRRYGIVLAGYADDTLLESFVLTSGHARHDMDTLARRHLGYETMKYVDLVGKGAKQIPFS
HVGVQEATQYAAEDADITLRLHCVLAPKLLAEPRLERVYREIEMPLVAVLERIEANGVQI
DAEELYKQSADLSRRMVIAQQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQP
STNEEALEAIVDQHALPRVILEYRSLAKLRNTYTEKLPEMIHPHTGRVHTNYHQAGAATG
RLSSSDPNLQNIPIRTDDGRRIRRAFVAPSGRKLIACDYSQIELRIMAHLSGDAGLVDAF
ESGVDVHCAIAAEVFGRGIDEVTPNERRAAKAINFGLIYGMSAFGLARQLGISRGEAQDY
IALYFDRFAGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAERAAINAP
MQGTAADIIKRAMVAVDGWLGVGGHRERALMILQVHDELVFEADEGFVPTLVHEVSARMA
AAAQLRVPLVVDVGVGHHWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattagttttaattgatgggtccagttacctttatcgtgcgtttcacgcattg
ccgccgctcagtaatgcagcaggtgaacctaccggtgcgttgttcggtgtggtcaacatg
ttgcgtactacattgaaggagcgcccggactatgctgctttcgtgattgatgctccaggg
aagacgtttcgcgatgctcttgattgcgaatacaaaatgcatcgtccgcctatgcctgat
gatttgcgtatgcaggtggagccgatgtgtgggattgtgcatgcgttaggtatcgatatt
ttgtgtattgatggggtggaggctgatgatgtgatcggcacattagctttagctgccgtt
gctgatgggattgcggtgacaatttctacgggtgataaggacttcgctcagttggtgcgt
ccaggtgtggagttggtcaacacaatgactggtagtcggatggactcggctatggcagtg
atcaataaattcggcgttgctccggatcagattattgattttttggcgttgatgggtgat
tcggtggataacgtgcctggtgtggataaatgcgggccgaagacagcagcgaagtggttg
gctgagtatggttcactggatgcggtgattgccaatgcggacaagatcaaggggaaaatt
ggtgacaatctgcgtattgtgctgccccgacttttgttaaatcgtgcgctgattacaatc
aagactgatgttgtattggagaagcgcccgcaggatttggcgctgcgtgagcgtgatact
gaagcgctgcgtgatttttaccggcggtatggcttcacacaggcattgaaggaactcgat
ggtggtagcgttgcagtcactgtggctgagcaggaacctgggcgtcggcgaaatgcgggt
ttccatgttgctcctgatgcatcggtggcaatggagattaatccggcgttgtctgcgccc
ggagagtacgagacgattttcacagttgagcagttgcaggattggattgtgcggttgcgg
gtggcgggtcagtttgctttggacactgaaaccgacagtctggatccaatgcaagcggtg
ctcattggcctgagttttgcgtcagaagtaggatgtgctgcttatttgccatttggtcat
gattaccctggtgcgcctgtgcagcttgatcgcgggcaggcgctggcattactgcaaccg
ctgctggaagatcctgcggtgcgtaaggtgggtcagcatggcaaatatgatatgcatgtg
ctgcgtcgttacggtatcgtgctcgctggttatgccgatgacactctattagaaagtttt
gtacttacttccggtcatgcgcgtcacgatatggatacgttggcgaggcgccaccttggt
tacgagacgatgaagtatgtcgatctggtgggtaagggagctaagcagattcctttttcg
catgtgggggttcaggaggccactcagtacgctgctgaggatgcggatatcacgttgcgc
ttgcactgtgtgctggcgcccaagttgttggccgagccacgtttggagcgggtctaccgt
gaaatcgaaatgccactggttgcagtgttggagcgcattgaggccaatggtgtgcagatt
gatgcagaggagttgtataagcagagtgctgatttgtcgcggcggatggttattgcgcag
caaaaggcgatggacttggcagggcgtcacttcaacttggattcaccgaaacagttacag
gtgctgttgtttgatgagctgaagttgccagtcgtggtgaagacgcccaaggggcagcca
tcgactaatgaggaggcgttggaggcgattgttgatcagcatgcgttgccgcgtgtcatt
ctggaatatcgcagcttggccaagctgcgcaatacctacactgagaaattgccggagatg
atccatccgcacactgggcgtgtgcataccaattaccatcaggccggtgctgctactggg
cggttgtcttcctcagatcccaatttgcagaatatcccgattcgtacagatgatggtcgc
cgtatccgtcgtgcttttgtggcgccttctgggcgcaagttgattgcttgcgattattcg
cagatcgagttgaggatcatggcgcatctttcaggtgatgcggggcttgttgatgcgttt
gagtctggtgtggatgtgcattgtgctatcgctgcggaggtgttcggtcgtggaattgat
gaggtgacgccgaatgagcgtcgtgcggcgaaggcaatcaattttggcttgatctacggg
atgagtgcgtttggcttggcgcgtcagcttggtatcagccgcggtgaggcgcaggattac
attgccttgtatttcgatcgttttgctggggtgcgtgattttatggaaaacacgcgtcag
caggcgcgtgatagagggtatgtagaaacggtgtttggacgccgtctgtatttgaactcc
attgccagcggtaaccagacacagcgtgccggtgctgagcgtgcagcgatcaatgcgcca
atgcagggtactgcggccgatatcatcaagcgtgccatggttgcagtggatggttggttg
ggagtgggagggcatcgggagcgtgcactgatgatcttgcaagtacacgatgaattagtg
tttgaggcggatgagggtttcgtgccgacgcttgtacatgaagtgtcggcacgaatggct
gcggcagcgcagttgcgtgtgccgttggttgtcgatgttggcgtaggtcatcactgggat
gaggcgcactga
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