KEGG   Xylella fastidiosa subsp. sandyi Ann-1: D934_03125
Entry
D934_03125        CDS       T03318                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xfs  Xylella fastidiosa subsp. sandyi Ann-1
Pathway
xfs03410  Base excision repair
xfs03430  Mismatch repair
xfs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    D934_03125
   03430 Mismatch repair
    D934_03125
   03440 Homologous recombination
    D934_03125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfs03400]
    D934_03125
DNA repair and recombination proteins [BR:xfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     D934_03125
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     D934_03125
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      D934_03125
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: AIC09528
UniProt: A0A060H1W6
LinkDB
Position
692183..693991
AA seq 602 aa
MPKIIRRLSLPLAVWPDNVPPLLRRVYTARGCADPVTAQPCLAQLLSPAMLSNMQAATVL
LTEVIKAKGRILVVGDFDCDGATACAVAVRGLRLLGARNVMHAVPNRMVHGYGLSSALVE
ELAPLQPALLVTVDHGIACHAGIAAAKARGWKVLVTDHHLPGETLPPADVIVNPNLPGDL
FPSKTLAGVGVIFYVLLALRARLYPAARAECEGQETRIHSSISQKNRPDLTSLLDLVAVG
TVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTATDIGFALSPRLN
AAGRLEDMALGIELLLTEDWTRARAIAAMLEEINAARRVVQQGMSDDAEQAVAQAMAQSD
GVLPMAVCLFDPDWHPGVIGLVASKMKDKMHRPVVALAPAEPGGTVLRGSARSIPGLHIR
DVLVALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVDKNVLQAELYSD
GELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKMEVRYSGRHDA
LNAIYFNGWQGDPPARRLRLAYRLVCDDYRGGDAIQLIVEYAEVIECDVLGSQAISSGLL
DP
NT seq 1809 nt   +upstreamnt  +downstreamnt
gtgcccaagattattcgccgtctctctttaccgctggctgtttggcctgacaatgtgccg
ccattgctgcgacgtgtgtacacggcacgtggttgtgctgatccggtgacggcgcaaccc
tgtctcgctcagttgttgtcacccgccatgctgagcaacatgcaggcagccactgtattg
ctgactgaggtcatcaaggccaaggggcgtattctggttgtcggtgattttgactgcgat
ggtgcaactgcctgtgcggttgcggtgcgtggtttgcgtttgcttggcgcgcgtaacgtg
atgcatgcggtccccaatcgtatggtgcatggttacggtttgtcgtcggcattggttgag
gagttggcaccgttgcagccagcgttgcttgttacggtggatcacggcattgcttgccat
gctggcattgctgctgctaaggcccgcggttggaaggtgttggtgactgatcaccatttg
ccgggtgaaaccttgcccccagccgatgtcattgttaatccgaatctgcctggcgatttg
tttccgagtaaaacgctggcgggtgtcggggtgatcttttatgtactgcttgcgctgcgt
gcgcgtctttatcctgctgctcgtgctgagtgcgaaggtcaagaaacgcgcattcacagt
tctatttctcagaaaaaccgtcctgatttgacgtccttactggatttagttgcggtcggg
acggttgccgacttggtgcctttagatacgaataatcgtgctttggttgctgcgggcttg
cgccggttgcgtcgtggtcaagggtgtctcggattacgcgcgttgattgaggtcagtggc
cgtgatgagtcgcaattgaccgctactgatattggttttgcattgagtccgcgtctgaac
gctgcgggacggttggaggatatggcgttgggcattgaattgttgctcactgaggattgg
actcgcgcacgtgctatcgcagccatgcttgaggagattaatgccgcacgccgtgtggta
cagcagggtatgagtgacgatgctgagcaggcagtagcgcaagcgatggcgcagtcagac
ggtgtgttgccaatggcggtgtgcctgttcgatccggactggcatccaggagtgattggt
ttggtcgcgtccaagatgaaggacaaaatgcaccgtccggtggtggctttagcaccggct
gagccgggaggtacagtgttgcgagggtcggcacggtcgatcccaggactgcatatccgc
gatgtattggtggcgctcgacagtggttatcccgggatgattcagaaatttggaggtcat
gcgatggcggccggcttgacactggatgcggaggtgttgccggtgttcgaacgtgtattt
cgtgcccaagttgagatgatggttgataagaatgtgttgcaggctgagttgtatagcgat
ggtgaattggcggccgatgagctggacgcattacatgcgcgggcattgcggctgggtggg
ccatggggacaggggtttccagagccattgtttgatggagagtttgaagtgctgcaatgg
cgtgtcctcaaggagcgtcatttgaaaatggaggtgcgttattcaggacggcatgacgct
ctgaacgctatttatttcaacggctggcagggtgatcctccagcacggcgattgcgtttg
gcatatcggttggtttgcgacgattaccgcggtggtgatgcgattcagttgatcgtggaa
tatgcggaagtgattgaatgtgatgtattgggttcccaagcaatttccagtggcctactt
gatccttag

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